RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Wscd1Q80XH4 572 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ppm1lQ8BHN0 360 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Mark4Q8CIP4 752 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Klhl2Q8JZP3 593 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Gstm4Q8R5I6 218 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Pcdhb6Q91XZ4 772 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Asb7Q91ZU0 318 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Chst12Q99LL3 419 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Zmat2Q9CPW7 199 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Med21Q9CQ39 144 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Clic3Q9D7P7 237 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ern2Q9Z2E3 911 aa10.05□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 ChrngP04760 519 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Dnmt3cP0DOY1 709 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Lmo2P25801 158 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Wnt3aP27467 352 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 SiaeP70665 541 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Wee2Q66JT0 555 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Tdp1Q8BJ37 609 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Galnt5Q8C102 930 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Panx3Q8CEG0 392 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Alas1Q8VC19 642 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 IrgqQ8VIM9 583 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Rnh1Q91VI7 456 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Lypd3Q91YK8 363 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ak5Q920P5 562 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ubxn2aQ99KJ0 258 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Tbc1d15Q9CXF4 671 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Utp11Q9CZJ1 253 aaKnown RBP10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Fam227bQ9D518 532 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Cldn22Q9D7U6 220 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ttll11A4Q9F4 727 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Slc1a6O35544 561 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Zfy2P20662 777 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Rps12P63323 132 aaKnown RBP10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 StamP70297 548 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Trim71Q1PSW8 855 aaKnown RBP10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Pyroxd1Q3TMV7 498 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Smyd5Q3TYX3 416 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Proser1Q5PRE5 913 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Wdr91Q7TMQ7 748 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Il17reQ8BH06 637 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Dis3lQ8C0S1 1053 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Prpf39Q8K2Z2 665 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Mul1Q8VCM5 352 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Olfr356Q8VFP5 315 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Cog2Q921L5 731 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Dcaf6Q9DC22 876 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 2310061I04RikB8JJ69 315 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 AlbP07724 608 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Alas2P08680 587 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Crabp2P22935 138 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 LdlrP35951 862 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ccna2P51943 422 aaKnown RBP10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Aqp4P55088 323 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Sparcl1P70663 650 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 RnaselQ05921 735 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Pecam1Q08481 727 aaKnown RBP10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Meaf6Q2VPQ9 191 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Faf2Q3TDN2 445 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 AcdQ5EE38 416 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Gata6Q61169 589 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Zbtb41Q811F1 908 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Zdhhc15Q8BGJ0 337 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Fam49aQ8BHZ0 323 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Kansl2Q8BQR4 486 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Afap1l1Q8BZI0 768 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Scara3Q8C850 606 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Lin52Q8CD94 116 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Slc36a1Q8K4D3 475 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ophn1Q99J31 802 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ing2Q9ESK4 281 aa10.04□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 PhipQ8VDD9 1821 aaKnown RBP10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Armt1A6H630 439 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Gm10719E9Q7T3 227 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 SprtnG3X912 497 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 AmacrO09174 381 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 HcrtO55241 130 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Pknox1O70477 436 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 ChgbP16014 677 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Cdk7Q03147 346 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Fam91a1Q3UVG3 837 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Znf512Q69Z99 562 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Scube1Q6NZL8 1018 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Trnp1Q80ZI1 223 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Clasp2Q8BRT1 1286 aaKnown RBP10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Podxl2Q8CAE9 603 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Sgsm3Q8VCZ6 750 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Itm2cQ91VK4 269 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Pcdhac2Q91Y09 1006 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Afg3l1Q920A7 789 aaKnown RBP10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Msi2Q920Q6 346 aaKnown RBP10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 SmtnQ921U8 923 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ndufa10Q99LC3 355 aaKnown RBP10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 CygbQ9CX80 190 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Klhl35Q9CZ49 574 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Pgam1Q9DBJ1 254 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Atp11cQ9QZW0 1129 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Ttc30a2A2AKQ8 664 aa10.03□□□□□ -0.8
Ccdc40-202ENSMUST00000053440 Sh2d4bA6X942 431 aa10.03□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms