RNA–Protein interactions for RNA: ENSMUST00000051408.7

Clrn1-201, Transcript of Clarin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clrn1, Length 1,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-201ENSMUST00000051408 IkbkeQ9R0T8 717 aa10.47□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Acot9Q9R0X4 439 aaKnown RBP10.47□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Cacna1aP97445 2368 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Igkv5-45A0A0B4J1J1 115 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Dthd1E9PZX1 795 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Fbrsl1E9Q9T0 1031 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 A630095N17RikJ3KMM7 116 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Olfr1022L7MTT3 315 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 CtslP06797 334 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Tsta3P23591 321 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Ctnnd1P30999 938 aaKnown RBP10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Gdi1P50396 447 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Nol4P60954 483 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 VegfcP97953 415 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Nlrp4cQ3TKR3 982 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 VwceQ3U515 929 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Foxr1Q3UTB7 268 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Afg1lQ3V384 480 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Cep295nlQ497N6 533 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Cpa2Q504N0 417 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Sun3Q5SS91 320 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Leo1Q5XJE5 667 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Cldn11Q60771 207 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Gpr19Q61121 415 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Tpgs2Q66JT5 296 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 CilpQ66K08 1184 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Rtl3Q6P1Y1 553 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Olfr212Q7TS33 327 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Ctxn3Q8BXZ0 80 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Slitrk6Q8C110 840 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Gatad2aQ8CHY6 629 aaKnown RBP10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Zmiz2Q8CIE2 920 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Rbm41Q8JZV4 413 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Rassf9Q8K342 435 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Sh3kbp1Q8R550 709 aaKnown RBP10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Recql5Q8VID5 982 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Twf1Q91YR1 350 aaKnown RBP10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Tor1aip1Q921T2 595 aaKnown RBP10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Npffr2Q924H0 417 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Prss28Q924N9 274 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 SardhQ99LB7 919 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Trmt11Q9CWH5 460 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Chordc1Q9D1P4 331 aaKnown RBP10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Fbxl12Q9EPX5 326 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 SgshQ9EQ08 502 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Herpud2Q9JJC9 404 aa10.46□□□□□ -0.73
Clrn1-201ENSMUST00000051408 Akap13E9Q394 2776 aa10.46□□□□□ -0.74
Clrn1-201ENSMUST00000051408 DspE9Q557 2883 aaKnown RBP10.46□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Gm2956E9PVJ0 216 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Cyp2w1E9Q816 493 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Sptbn5F6UCX4 1208 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Gm8108K7N734 216 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Abcb1bP06795 1276 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Id3P41133 119 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Slc11a2P49282 568 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Plk2P53351 682 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 SnrpfP62307 86 aaKnown RBP10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Fgf14P70379 247 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Nfatc3P97305 1075 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Gjb5Q02739 271 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Tnfaip8l3Q3TBL6 204 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Usp30Q3UN04 517 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Slc6a4Q60857 630 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Nab2Q61127 525 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 NovQ64299 354 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Rrp12Q6P5B0 1295 aaKnown RBP10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Q6PD19 689 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Frmd4aQ8BIE6 1020 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Cmtr2Q8BWQ4 767 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 MtrrQ8C1A3 696 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Parp9Q8CAS9 866 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Pop1Q8K205 1045 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Tceal3Q8R0A5 200 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Dusp15Q8R4V2 235 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Olfr1233Q8VGN0 305 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Cts3Q91ZD5 332 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Fam49bQ921M7 324 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Znf281Q99LI5 893 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Cdca3Q99M54 266 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Prpf4Q9DAW6 521 aaKnown RBP10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 TnmdQ9EP64 317 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Cacng3Q9JJV5 315 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Tlr5Q9JLF7 859 aa10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Tjp2Q9Z0U1 1167 aaKnown RBP10.45□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Rai1Q61818 1889 aa10.44□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Auts2A0A087WPF7 1261 aa10.44□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Gm12394A2AKP6 982 aa10.44□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Gm4846B2RWH8 538 aa10.44□□□□□ -0.74
Clrn1-201ENSMUST00000051408 1700015F17RikD3YUK8 150 aa10.44□□□□□ -0.74
Clrn1-201ENSMUST00000051408 1700011I03RikE9PYL8 271 aa10.44□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Vmn2r79E9Q067 851 aa10.44□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Gm597E9Q8J5 896 aa10.44□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Gimap9G3X987 291 aa10.44□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Vmn2r15L7N2A0 855 aa10.44□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Gfra2O08842 464 aa10.44□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Pla2g4bP0C871 782 aa10.44□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Rb1P13405 921 aa10.44□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Rplp1P47955 114 aa10.44□□□□□ -0.74
Clrn1-201ENSMUST00000051408 CidecP56198 239 aa10.44□□□□□ -0.74
Clrn1-201ENSMUST00000051408 Trim43cP86449 446 aa10.44□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms