RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gtf2ird2Q99NI3 936 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Fip1l1Q9D824 581 aaKnown RBP13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Atp13a1Q9EPE9 1200 aaKnown RBP13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Ing2Q9ESK4 281 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Ddx21Q9JIK5 851 aaKnown RBP13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Tdp2Q9JJX7 370 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Dnaja2Q9QYJ0 412 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Iigp1Q9QZ85 413 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Magea2Q9R2A2 320 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Armt1A6H630 439 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Gm10722F6VLK5 217 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 2610028H24RikG5E8K1 270 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Gm17535J3KMR8 224 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Pknox1O70477 436 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 ChrngP04760 519 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Hoxb8P09632 243 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 PfkmP47857 780 aaKnown RBP13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 CstaP56567 97 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Tmprss11eQ5S248 423 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Olfr798Q7TRH8 311 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Kansl2Q8BQR4 486 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Nup85Q8R480 656 aaKnown RBP13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Pcdhb10Q91VE5 797 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Pcdhb6Q91XZ4 772 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Krt5Q922U2 580 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Lysmd3Q99LE3 305 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 MrgbpQ9DAT2 204 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Map7d3A2AEY4 876 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Dhtkd1A2ATU0 921 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 UprtB1AVZ0 310 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Gm6205E9PZS2 359 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Olfr731F8VQB9 326 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Soat2O88908 525 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Scg3P47867 471 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Polr1bP70700 1135 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Mcm9Q2KHI9 1134 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Faf2Q3TDN2 445 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 9930111J21Rik1Q5SVP0 844 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Cept1Q8BGS7 416 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 SowahaQ8BLS7 548 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Hsdl1Q8BTX9 330 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Gm6367Q8C6L9 287 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Pcolce2Q8R4W6 414 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Adcy4Q91WF3 1077 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 FdpsQ920E5 353 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Haus8Q99L00 373 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Cox16Q9CR63 106 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Gpr45Q9EQQ4 373 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 Acox2Q9QXD1 681 aa13.78□□□□□ -0.2
Nup88-201ENSMUST00000035283 A630010A05RikA9C473 232 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 1700024B05RikE9Q6D7 167 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pdzd7E9Q9W7 1021 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Vmn1r39G3UWE6 305 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 IkbkgO88522 412 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 InvsO89019 1062 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Clcn3P51791 818 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Cdh5P55284 784 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Wee2Q66JT0 555 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Mbtd1Q6P5G3 631 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ccdc154Q6RUT8 657 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Olfr392Q7TRX6 312 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Baiap2l2Q80Y61 522 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Slc22a19Q8VCA0 551 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Fam114a2Q8VE88 497 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Cog2Q921L5 731 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Xpo5Q924C1 1204 aaKnown RBP13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Tas1r3Q925D8 858 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pex6Q99LC9 981 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ttc30bQ9CY00 664 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pgm3Q9CYR6 542 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Cab39lQ9DB16 337 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 QkiQ9QYS9 341 aaKnown RBP13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Atp11cQ9QZW0 1129 aa13.77□□□□□ -0.21
Nup88-201ENSMUST00000035283 Gm3173A6NAS3 172 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Gm44503E9PYU5 387 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Gm3020E9Q3J7 150 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Gm2897K7N6T7 172 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Neu1O35657 409 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Alas2P08680 587 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Dpy19l2P0CW70 773 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Usp46P62069 366 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 AcadsQ07417 412 aaKnown RBP13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Fbxo39Q5NBU5 443 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ptpn14Q62130 1189 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Exoc3l4Q6DIA2 721 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pum3Q8BKS9 647 aaKnown RBP13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Cops7bQ8BV13 264 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Gm3411Q8C7R2 150 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ccdc63Q8CDV6 558 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Mark4Q8CIP4 752 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ipo11Q8K2V6 975 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ggt7Q99JP7 662 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Dcp2Q9CYC6 422 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 PirQ9D711 290 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Zfyve19Q9DAZ9 389 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Itgb1bp2Q9R000 350 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pcna-ps2A0A140T8V5 261 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Olfr1160A2AVT0 319 aa13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Taf4E9QAP7 1042 aaKnown RBP13.76□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pold2O35654 469 aa13.76□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms