RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Q9CQF4 240 aa23.64■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Ribc2Q9D4Q1 309 aa23.64■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Hipk3Q9ERH7 1192 aa23.64■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Limd1Q9QXD8 668 aa23.64■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 A930018M24RikB7ZMY3 218 aa23.64■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Gm5799E9Q2M1 201 aa23.64■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Pabpc1P29341 636 aaKnown RBP23.64■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 VwdeQ6DFV8 926 aa23.64■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Znf280cQ6P3Y5 742 aa23.64■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Dlg1Q811D0 905 aaKnown RBP23.64■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Adck1Q9D0L4 525 aa23.64■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Sv2aQ9JIS5 742 aa23.64■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Lgr4A2ARI4 951 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Cma1P21844 247 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Pik3r5Q5SW28 871 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Nr1d2Q60674 576 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Them6Q80ZW2 207 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Ubash3bQ8BGG7 638 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Dnaja4Q9JMC3 397 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Gm20509G3UZF1 325 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Lpcat1Q3TFD2 534 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Cand2Q6ZQ73 1235 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Nat14Q8BVG8 206 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Cdc16Q8R349 620 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Akr1c20Q8VC77 323 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Klrb1fQ8VD98 217 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Tmed11Q9D2R4 215 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Mrpl19Q9D338 292 aaKnown RBP23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Hes6Q9JHE6 224 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Katna1Q9WV86 491 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Dyrk1bQ9Z188 629 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Mroh2aD3Z750 1679 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Hesx1Q61658 185 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Fam126bQ8C729 530 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Plbd1Q8VCI0 550 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 TpbpbQ9CQC0 121 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Rnf135Q9CWS1 417 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Zfyve16Q80U44 1528 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Gm3264L7N2C5 238 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 ChgbP16014 677 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Atp11bQ6DFW5 1175 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Pcdh18Q8VHR0 1134 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Txndc5Q91W90 417 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 B3galt6Q91Z92 325 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Necab2Q91ZP9 389 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Lrrc71Q9D3W5 558 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Lrpap1P55302 360 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Grm2Q14BI2 872 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Sfmbt2Q5DTW2 938 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Bcs1lQ9CZP5 418 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Krtap5-3Q9D226 196 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Eef1akmt2Q9D853 244 aa23.63■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Vmn2r63E9Q0K5 859 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Gm9268E9Q0M3 861 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Vmn2r62K7N712 859 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Gbx2P48031 348 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Larp7Q05CL8 570 aaKnown RBP23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Brip1Q5SXJ3 1174 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Rrm2bQ6PEE3 351 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Clca4aQ6Q473 924 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Cdh19E9Q3A7 770 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Zfp217Q3U0X6 1041 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Lrrc8bQ5DU41 803 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Klra8Q60682 266 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Arel1Q8CHG5 823 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Cdc73Q8JZM7 531 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 TfQ921I1 697 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Abca6Q8K441 1624 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Ttc23lA6H6E9 458 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 AmacrO09174 381 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Stk16O88697 305 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Mmp20P57748 482 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 P3h1Q3V1T4 739 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Itga1Q3V3R4 1179 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Mief2Q5NCS9 454 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Sema4bQ62179 823 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Pcsk9Q80W65 694 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 3830417A13RikQ8BQJ2 303 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Robo2Q7TPD3 1470 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Tubb1A2AQ07 451 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Teddm1bQ8CC62 306 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Rwdd4Q9CPR1 188 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Snx7Q9CY18 387 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Pnpla7A2AJ88 1352 aa23.62■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Ccdc8D3YZV8 685 aa23.61■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 AmhP27106 555 aa23.61■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Mtf2Q02395 593 aa23.61■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Mrps35Q8BJZ4 320 aaKnown RBP23.61■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Gtf2ird2Q99NI3 936 aa23.61■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Khdrbs3Q9R226 346 aaKnown RBP23.61■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Tmem115Q9WUH1 350 aa23.61■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Grik3B1AS29 919 aa23.61■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Serpinb5P70124 375 aaKnown RBP23.61■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Podnl1Q6P3Y9 559 aa23.61■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 CenpxQ8C4X1 78 aa23.61■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Cox10Q8CFY5 443 aa23.61■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Ulk2Q9QY01 1037 aa23.61■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Zc3h7aE9PWW6 970 aaKnown RBP23.61■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Rb1P13405 921 aa23.61■■□□□ 1.37
Sh3rf1-201ENSMUST00000034060 Akr1c6P70694 323 aa23.61■■□□□ 1.37
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms