RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Bnip1Q6QD59 228 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Fam107aQ78TU8 144 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Tmem198Q8BG75 360 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 MyocdQ8VIM5 935 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Snx15Q91WE1 337 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Toe1Q9D2E2 511 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 DgkeQ9R1C6 564 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Tnni1Q9WUZ5 187 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Ern2Q9Z2E3 911 aa18.27■□□□□ 0.52
Ptpra-201ENSMUST00000028769 Psme4Q5SSW2 1843 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Arhgef37A1IGU4 676 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Ebf3O08791 596 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Pknox1O70477 436 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 RnaselQ05921 735 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Serpina6Q06770 397 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Map3k9Q3U1V8 1077 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Adrbk2Q3UYH7 688 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Abhd10Q6PE15 297 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Zdhhc19Q810M5 347 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Cdkn3Q810P3 211 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Zbtb41Q811F1 908 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 GnsQ8BFR4 544 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Klhl38Q8BSF5 581 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Prpf39Q8K2Z2 665 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Dedd2Q8QZV0 330 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 MutyhQ99P21 515 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 RalbQ9JIW9 206 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 PignQ9R1S3 931 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Tmem115Q9WUH1 350 aa18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Ddx39bQ9Z1N5 428 aaKnown RBP18.27■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Gpd1lQ3ULJ0 351 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Aldh1a2Q62148 518 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Rps27lQ6ZWY3 84 aaKnown RBP18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Gramd1bQ80TI0 738 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Bmp3Q8BHE5 468 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 SybuQ8BHS8 665 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Plin5Q8BVZ1 463 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Afap1l1Q8BZI0 768 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 AA792892Q8C6S1 278 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Sik2Q8CFH6 931 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Dcp2Q9CYC6 422 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Syde1Q9DBZ9 737 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Stap1Q9JM90 297 aaKnown RBP18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Med20Q9R0X0 212 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Rtl9Q32KG4 1339 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Abhd12bG3UZN6 359 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Tnk2O54967 1055 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Abcb1bP06795 1276 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Itga3Q62470 1053 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Tcaf3Q6QR59 914 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 LppQ8BFW7 613 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Pcdhb7Q8CDY9 829 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Olfr809Q8VEX8 328 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Sntg2Q925E0 539 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Ecrg4Q99LS0 148 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Ropn1Q9ESG2 212 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Hey2Q9QUS4 339 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Map3k6Q9WTR2 1291 aa18.26■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Gm28043E0CXC2 719 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Plekha5E9Q6H8 1269 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 ItgalP24063 1163 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Msx3P70354 204 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Fscn2Q32M02 492 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 PhgdhQ61753 533 aaKnown RBP18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Arl13bQ640N2 427 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Arhgap10Q6Y5D8 786 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Gxylt2Q810K9 444 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Xylt1Q811B1 953 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Ireb2Q811J3 963 aaKnown RBP18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Wdr60Q8C761 999 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Fam160b1Q8CDM8 764 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Lypd3Q91YK8 363 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Arpc2Q9CVB6 300 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 MtrexQ9CZU3 1040 aaKnown RBP18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 CabyrQ9D424 453 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Gm281D3Z1Y0 860 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 PiggD3Z3Y1 983 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Rad51ap2G3UW63 976 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 2610028H24RikG5E8K1 270 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Pim1P06803 397 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Tgfb2P27090 414 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Vps45P97390 570 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Sort1Q6PHU5 825 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 SgczQ8BX51 311 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Ago3Q8CJF9 860 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Myoz3Q8R4E4 245 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Sept6Q9R1T4 434 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Znf536Q8K083 1302 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Fam155bA2BDP1 471 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Dnmt3cP0DOY1 709 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Mmp3P28862 477 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 PrkcdP28867 674 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 PgrQ00175 926 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Mgat3Q10470 538 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Ubtfl1Q3USZ2 394 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Olfr1105Q7TR58 312 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 EmsyQ8BMB0 1264 aaKnown RBP18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Fra10ac1Q8BP78 315 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 HpdlQ8K248 371 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Mkl1Q8K4J6 964 aa18.25■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms