RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 GATAD2AQ86YP4 633 aa15.67■□□□□ 0.1
SYNE2-228ENST00000639659 ZNF276Q8N554 614 aa15.67■□□□□ 0.1
SYNE2-228ENST00000639659 RBBP8NLQ8NC74 664 aaPredicted RBP15.67■□□□□ 0.1
SYNE2-228ENST00000639659 WFIKKN2Q8TEU8 576 aa15.67■□□□□ 0.1
SYNE2-228ENST00000639659 IGSF8Q969P0 613 aa15.67■□□□□ 0.1
SYNE2-228ENST00000639659 PCED1AQ9H1Q7 454 aa15.67■□□□□ 0.1
SYNE2-228ENST00000639659 MTG2Q9H4K7 406 aa15.67■□□□□ 0.1
SYNE2-228ENST00000639659 GGA2Q9UJY4 613 aa15.67■□□□□ 0.1
SYNE2-228ENST00000639659 GCN1Q92616 2671 aaKnown RBP15.66■□□□□ 0.1
SYNE2-228ENST00000639659 TULP2O00295 520 aa15.66■□□□□ 0.1
SYNE2-228ENST00000639659 PLK4O00444 970 aa15.66■□□□□ 0.1
SYNE2-228ENST00000639659 MSI1O43347 362 aaKnown RBP15.66■□□□□ 0.1
SYNE2-228ENST00000639659 ZBED1O96006 694 aa15.66■□□□□ 0.1
SYNE2-228ENST00000639659 PABPC1P11940 636 aaKnown RBP15.66■□□□□ 0.1
SYNE2-228ENST00000639659 CD27P26842 260 aa15.66■□□□□ 0.1
SYNE2-228ENST00000639659 ABCG1P45844 678 aa15.66■□□□□ 0.1
SYNE2-228ENST00000639659 RPS14P62263 151 aaKnown RBP15.66■□□□□ 0.1
SYNE2-228ENST00000639659 KCNT1Q5JUK3 1230 aa15.66■□□□□ 0.1
SYNE2-228ENST00000639659 MBLAC2Q68D91 279 aa15.66■□□□□ 0.1
SYNE2-228ENST00000639659 AHI1Q8N157 1196 aa15.66■□□□□ 0.1
SYNE2-228ENST00000639659 PDCD7Q8N8D1 485 aaKnown RBP15.66■□□□□ 0.1
SYNE2-228ENST00000639659 SLC4A11Q8NBS3 891 aa15.66■□□□□ 0.1
SYNE2-228ENST00000639659 CCDC47Q96A33 483 aaKnown RBP15.66■□□□□ 0.1
SYNE2-228ENST00000639659 TMA16Q96EY4 203 aaKnown RBP15.66■□□□□ 0.1
SYNE2-228ENST00000639659 TMEM176AQ96HP8 235 aa15.66■□□□□ 0.1
SYNE2-228ENST00000639659 IPO9Q96P70 1041 aaKnown RBP15.66■□□□□ 0.1
SYNE2-228ENST00000639659 LRRC4Q9HBW1 653 aa15.66■□□□□ 0.1
SYNE2-228ENST00000639659 PRSS16Q9NQE7 514 aa15.66■□□□□ 0.1
SYNE2-228ENST00000639659 CISHQ9NSE2 258 aa15.66■□□□□ 0.1
SYNE2-228ENST00000639659 STIM2Q9P246 746 aa15.66■□□□□ 0.1
SYNE2-228ENST00000639659 MUC22E2RYF6 1773 aaPredicted RBP15.66■□□□□ 0.1
SYNE2-228ENST00000639659 BPTFQ12830 3046 aa15.66■□□□□ 0.1
SYNE2-228ENST00000639659 CABIN1Q9Y6J0 2220 aa15.66■□□□□ 0.1
SYNE2-228ENST00000639659 PLXNA2O75051 1894 aa15.65■□□□□ 0.1
SYNE2-228ENST00000639659 A0A1B0GVL5 298 aa15.65■□□□□ 0.1
SYNE2-228ENST00000639659 CBX4O00257 560 aa15.65■□□□□ 0.1
SYNE2-228ENST00000639659 F13A1P00488 732 aa15.65■□□□□ 0.1
SYNE2-228ENST00000639659 PRB1P04280 392 aa15.65■□□□□ 0.1
SYNE2-228ENST00000639659 HSP90AA1P07900 732 aaKnown RBP15.65■□□□□ 0.1
SYNE2-228ENST00000639659 CD19P15391 556 aa15.65■□□□□ 0.1
SYNE2-228ENST00000639659 POLR2EP19388 210 aaKnown RBP15.65■□□□□ 0.1
SYNE2-228ENST00000639659 SGSHP51688 502 aa15.65■□□□□ 0.1
SYNE2-228ENST00000639659 ADIGQ0VDE8 80 aa15.65■□□□□ 0.1
SYNE2-228ENST00000639659 ZNF776Q68DI1 518 aaPredicted RBP15.65■□□□□ 0.1
SYNE2-228ENST00000639659 DBX2Q6ZNG2 339 aa15.65■□□□□ 0.1
SYNE2-228ENST00000639659 SIX6OS1Q8N1H7 587 aa15.65■□□□□ 0.1
SYNE2-228ENST00000639659 SEMA4DQ92854 862 aa15.65■□□□□ 0.1
SYNE2-228ENST00000639659 TATDN2Q93075 761 aa15.65■□□□□ 0.1
SYNE2-228ENST00000639659 EEF2KMTQ96G04 330 aa15.65■□□□□ 0.1
SYNE2-228ENST00000639659 SLC6A18Q96N87 628 aa15.65■□□□□ 0.1
SYNE2-228ENST00000639659 ACE2Q9BYF1 805 aaPredicted RBP15.65■□□□□ 0.1
SYNE2-228ENST00000639659 TMEM245Q9H330 911 aa15.65■□□□□ 0.1
SYNE2-228ENST00000639659 TMEM8AQ9HCN3 771 aa15.65■□□□□ 0.1
SYNE2-228ENST00000639659 AASDHPPTQ9NRN7 309 aa15.65■□□□□ 0.1
SYNE2-228ENST00000639659 OLA1Q9NTK5 396 aaKnown RBP15.65■□□□□ 0.1
SYNE2-228ENST00000639659 NCKAP1Q9Y2A7 1128 aa15.65■□□□□ 0.1
SYNE2-228ENST00000639659 TBL1XO60907 577 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 DKK1O94907 266 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 ATP5BP06576 529 aaKnown RBP15.64■□□□□ 0.09
SYNE2-228ENST00000639659 ZSCAN22P10073 491 aaPredicted RBP15.64■□□□□ 0.09
SYNE2-228ENST00000639659 PFKFB1P16118 471 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 CD70P32970 193 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 PSMC2P35998 433 aaKnown RBP15.64■□□□□ 0.09
SYNE2-228ENST00000639659 MXI1P50539 228 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 RAD23BP54727 409 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 SEMG2Q02383 582 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 PDE4CQ08493 712 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 CAMK2BQ13554 666 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 TRIP4Q15650 581 aaPredicted RBP15.64■□□□□ 0.09
SYNE2-228ENST00000639659 PTPRNQ16849 979 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 RAB41Q5JT25 222 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 KIAA0895LQ68EN5 471 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 KRT39Q6A163 491 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 RFWD3Q6PCD5 774 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 ADIPOR2Q86V24 386 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 FAM217AQ8IXS0 508 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 ZC3H3Q8IXZ2 948 aaKnown RBP15.64■□□□□ 0.09
SYNE2-228ENST00000639659 WFDC5Q8TCV5 224 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 SGK2Q9HBY8 427 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 DKK4Q9UBT3 224 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 HESX1Q9UBX0 185 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 TSPAN16Q9UKR8 245 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 TRAF3IP3Q9Y228 551 aa15.64■□□□□ 0.09
SYNE2-228ENST00000639659 GOLGA6L7A0A1B0GV03 622 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 PIK3R2O00459 728 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 MAPK13O15264 365 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 PCDHGA12O60330 932 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 ITGAVP06756 1048 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 DLDP09622 509 aaKnown RBP15.63■□□□□ 0.09
SYNE2-228ENST00000639659 PRR29P0C7W0 189 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 LCP1P13796 627 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 JUPP14923 745 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 ABCB4P21439 1286 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 RPL13P26373 211 aaKnown RBP15.63■□□□□ 0.09
SYNE2-228ENST00000639659 CTSKP43235 329 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 ST8SIA6P61647 398 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 DNM1Q05193 864 aaKnown RBP15.63■□□□□ 0.09
SYNE2-228ENST00000639659 DNAJC3Q13217 504 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 SMAD1Q15797 465 aaKnown RBP15.63■□□□□ 0.09
SYNE2-228ENST00000639659 DHX40Q8IX18 779 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms