RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 FAM129CQ86XR2 697 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 SCUBE3Q8IX30 993 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 PPIL6Q8IXY8 311 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 CATSPER1Q8NEC5 780 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 PACSIN1Q9BY11 444 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 BLOC1S6Q9UL45 172 aa18.25■□□□□ 0.51
CACNA1A-227ENST00000636549 ADGBQ8N7X0 1667 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 GUCY1B2O75343 617 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 EIF4BP23588 611 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 MYL6P60660 151 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 CBWD6Q4V339 395 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 TCHHL1Q5QJ38 904 aaPredicted RBP18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 PRSS58Q8IYP2 241 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 FAM151AQ8WW52 585 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 SMPDL3BQ92485 455 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 NTRK1P04629 796 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 CDH8P55286 799 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 RNF148Q8N7C7 305 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 ZNF671Q8TAW3 534 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 MCOLN3Q8TDD5 553 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 A0A0B4J269 797 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 FAM220BPB1ANY3 271 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 ZNF37AP17032 561 aaPredicted RBP18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 ATP2C1P98194 919 aaPredicted RBP18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 LAMTOR4Q0VGL1 99 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 RABL6Q3YEC7 729 aaPredicted RBP18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 ZNF473Q8WTR7 871 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 NR2E3Q9Y5X4 410 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 TBL1XO60907 577 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 GEMIN4P57678 1058 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 WDR24Q96S15 920 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 CNPPD1Q9BV87 410 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 GRXCR2A6NFK2 248 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 ISM1B1AKI9 464 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 H3BRB1 525 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 TSPAN8P19075 237 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 BCL2L1Q07817 233 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 TBX2Q13207 712 aaPredicted RBP18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 CEP170Q5SW79 1584 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 MPZL3Q6UWV2 235 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 CDCA5Q96FF9 252 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 ENTPD4Q9Y227 616 aa18.24■□□□□ 0.51
CACNA1A-227ENST00000636549 HOXA2O43364 376 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 KRT16P08779 473 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 AGKQ53H12 422 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 CNSTQ6PJW8 725 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 TSPAN14Q8NG11 270 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 PCDH12Q9NPG4 1184 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 CNGB3Q9NQW8 809 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 ADCY6O43306 1168 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 ATG7O95352 703 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 GJB6O95452 261 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 SUPT20HL2P0C7V6 817 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 TFPIP10646 304 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 CASP12Q6UXS9 341 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 TMEM26Q6ZUK4 368 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 RAD51AP1Q96B01 352 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 NCAPD2Q15021 1401 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 PAICSP22234 425 aaKnown RBP18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 CHRNB3Q05901 458 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 IKBKEQ14164 716 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 RAP1GAP2Q684P5 730 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 ILKAPQ9H0C8 392 aaPredicted RBP18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 MRPS23Q9Y3D9 190 aaKnown RBP18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 TRPC5OSA6NMA1 111 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 ZCCHC18P0CG32 403 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 ITPKBP27987 946 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 ERMARDQ5T6L9 678 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 TRNT1Q96Q11 434 aaKnown RBP18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 PCDHA11Q9Y5I1 949 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 KDM6AO15550 1401 aaPredicted RBP18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 TBC1D3DA0A087WVF3 549 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 TBC1D3IA0A087WXS9 549 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 TBC1D3EA0A087X179 549 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 TBC1D3KA0A087X1G2 549 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 TBC1D3FA6NER0 549 aaPredicted RBP18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 TBC1D3LB9A6J9 549 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 TBC1D3HP0C7X1 549 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 TBC1D3GQ6DHY5 549 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 TBC1D3CQ6IPX1 549 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 SERPINA13PQ6UXR4 307 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 GALNTL5Q7Z4T8 443 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 TBC1D3Q8IZP1 549 aaPredicted RBP18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 ADAM2Q99965 735 aa18.23■□□□□ 0.51
CACNA1A-227ENST00000636549 RBAK-RBAKDNI3L0D1 243 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 BTN3A1O00481 513 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 HNRNPRO43390 633 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 STK4Q13043 487 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 COL9A2Q14055 689 aaPredicted RBP18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 PRUNE1Q86TP1 453 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 SEMA6AQ9H2E6 1030 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 HAO1Q9UJM8 370 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 SH3D21A4FU49 640 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 SLC16A3O15427 465 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 PCCBP05166 539 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 MAPK1P28482 360 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 CENPCQ03188 943 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 TTC23Q5W5X9 447 aa18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 GUF1Q8N442 669 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-227ENST00000636549 RERGQ96A58 199 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms