RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 IVDP26440 423 aa13.5□□□□□ -0.25
FOXN3-219ENST00000615335 LRPAP1P30533 357 aa13.5□□□□□ -0.25
FOXN3-219ENST00000615335 ASPAP45381 313 aa13.5□□□□□ -0.25
FOXN3-219ENST00000615335 PPIGQ13427 754 aaKnown RBP eCLIP13.5□□□□□ -0.256e-8■□□□□ 10.1
FOXN3-219ENST00000615335 TRIP13Q15645 432 aaPredicted RBP13.5□□□□□ -0.25
FOXN3-219ENST00000615335 ACAD11Q709F0 780 aa13.5□□□□□ -0.25
FOXN3-219ENST00000615335 NANOGNBQ7Z5D8 188 aa13.5□□□□□ -0.25
FOXN3-219ENST00000615335 ZNF677Q86XU0 584 aa13.5□□□□□ -0.25
FOXN3-219ENST00000615335 CROCCP3Q8IVE0 287 aa13.5□□□□□ -0.25
FOXN3-219ENST00000615335 VRTNQ9H8Y1 702 aa13.5□□□□□ -0.25
FOXN3-219ENST00000615335 ANAPC5Q9UJX4 755 aa13.5□□□□□ -0.25
FOXN3-219ENST00000615335 CHKBQ9Y259 395 aa13.5□□□□□ -0.25
FOXN3-219ENST00000615335 SNX9Q9Y5X1 595 aa13.5□□□□□ -0.25
FOXN3-219ENST00000615335 LAMA2P24043 3122 aaKnown RBP13.49□□□□□ -0.25
FOXN3-219ENST00000615335 INPPL1O15357 1258 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 HOXA2O43364 376 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 THAP12O43422 761 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 T-ENOLP0DO92 83 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 ADCY8P40145 1251 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 PNPLA4P41247 253 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 NSFP46459 744 aaKnown RBP13.49□□□□□ -0.25
FOXN3-219ENST00000615335 TAF6P49848 677 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 GATMP50440 423 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 TUSC3Q13454 348 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 HSP90AA5PQ58FG0 334 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 PPP1R21Q6ZMI0 780 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 CRIPAKQ8N1N5 446 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 ZNF560Q96MR9 790 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 FAM193BQ96PV7 902 aaPredicted RBP13.49□□□□□ -0.25
FOXN3-219ENST00000615335 HNRNPABQ99729 332 aaKnown RBP13.49□□□□□ -0.25
FOXN3-219ENST00000615335 PAAF1Q9BRP4 392 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 HERPUD2Q9BSE4 406 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 KRT82Q9NSB4 513 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 DNAJC17Q9NVM6 304 aaKnown RBP13.49□□□□□ -0.25
FOXN3-219ENST00000615335 ZNF180Q9UJW8 692 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 KANSL1LA0AUZ9 987 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 KPNA7A9QM74 516 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 TBX10O75333 385 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 KRT36O76013 467 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 ZWINTO95229 277 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 STAU1O95793 577 aaKnown RBP13.49□□□□□ -0.25
FOXN3-219ENST00000615335 AMHP03971 560 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 CENPCQ03188 943 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 KYNUQ16719 465 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 ZNF280BQ86YH2 543 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 NUP93Q8N1F7 819 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 FNDC8Q8TC99 324 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 KCNK9Q9NPC2 374 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 TBC1D13Q9NVG8 400 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 PCDHB4Q9Y5E5 795 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 FADS3Q9Y5Q0 445 aa13.49□□□□□ -0.25
FOXN3-219ENST00000615335 HGSO14964 777 aaPredicted RBP13.48□□□□□ -0.25
FOXN3-219ENST00000615335 CCDC22O60826 627 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 EFCAB14O75071 495 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 CBFA2T3O75081 653 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 RPL9P32969 192 aaKnown RBP13.48□□□□□ -0.25
FOXN3-219ENST00000615335 RAP1GAPP47736 663 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 CDH8P55286 799 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 LILRA4P59901 499 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 PTP4A2Q12974 167 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 INAQ16352 499 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 UPP1Q16831 310 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 SV2CQ496J9 727 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 LIN9Q5TKA1 542 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 FAM117BQ6P1L5 589 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 TMEM270Q6UE05 265 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 VSTM1Q6UX27 236 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 C16orf59Q7L2K0 433 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 IQCF2Q8IXL9 164 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 ZBED8Q8IZ13 594 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 CASD1Q96PB1 797 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 ECSITQ9BQ95 431 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 SMYD3Q9H7B4 428 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 CISHQ9NSE2 258 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 NKIRAS1Q9NYS0 192 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 DNAJB4Q9UDY4 337 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 ZNF711Q9Y462 761 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 CEP290O15078 2479 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 TBKBP1A7MCY6 615 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 ZBBXA8MT70 800 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 SPTLC1O15269 473 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 B3GAT3O94766 335 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 BAIAP3O94812 1187 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 DDHD2O94830 711 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 PROSCO94903 275 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 FGBP02675 491 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 RALAP11233 206 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 CREB1P16220 341 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 CRABP2P29373 138 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 VPS41P49754 854 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 WDR5P61964 334 aaKnown RBP13.48□□□□□ -0.25
FOXN3-219ENST00000615335 GRM2Q14416 872 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 BCL2A1Q16548 175 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 LLGL2Q6P1M3 1020 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 TMCO2Q7Z6W1 182 aaPredicted RBP13.48□□□□□ -0.25
FOXN3-219ENST00000615335 ANKRD42Q8N9B4 389 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 BBOF1Q8ND07 529 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 GAB3Q8WWW8 586 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 TOP1MTQ969P6 601 aa13.48□□□□□ -0.25
FOXN3-219ENST00000615335 NMD3Q96D46 503 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms