RNA–Protein interactions for RNA: ENST00000614494.1

TARDBP-216, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-216ENST00000614494 TTC39BQ5VTQ0 682 aaPredicted RBP7.55□□□□□ -1.2
TARDBP-216ENST00000614494 FOXD4L5Q5VV16 416 aaPredicted RBP7.55□□□□□ -1.2
TARDBP-216ENST00000614494 ZNF776Q68DI1 518 aaPredicted RBP7.55□□□□□ -1.2
TARDBP-216ENST00000614494 MSANTD2Q6P1R3 559 aa7.55□□□□□ -1.2
TARDBP-216ENST00000614494 LRSAM1Q6UWE0 723 aa7.55□□□□□ -1.2
TARDBP-216ENST00000614494 TOGARAM2Q6ZUX3 1019 aa7.55□□□□□ -1.2
TARDBP-216ENST00000614494 RAB44Q7Z6P3 723 aaPredicted RBP7.55□□□□□ -1.2
TARDBP-216ENST00000614494 DENND1CQ8IV53 801 aa7.55□□□□□ -1.2
TARDBP-216ENST00000614494 SLC41A1Q8IVJ1 513 aa7.55□□□□□ -1.2
TARDBP-216ENST00000614494 SFTPA1Q8IWL2 248 aa7.55□□□□□ -1.2
TARDBP-216ENST00000614494 SLC4A11Q8NBS3 891 aa7.55□□□□□ -1.2
TARDBP-216ENST00000614494 HJURPQ8NCD3 748 aaPredicted RBP7.55□□□□□ -1.2
TARDBP-216ENST00000614494 FOXD4L4Q8WXT5 416 aaPredicted RBP7.55□□□□□ -1.2
TARDBP-216ENST00000614494 TMA16Q96EY4 203 aaKnown RBP7.55□□□□□ -1.2
TARDBP-216ENST00000614494 HSFY1Q96LI6 401 aa7.55□□□□□ -1.2
TARDBP-216ENST00000614494 CEP63Q96MT8 703 aa7.55□□□□□ -1.2
TARDBP-216ENST00000614494 TIGD1Q96MW7 591 aa7.55□□□□□ -1.2
TARDBP-216ENST00000614494 NT5C1BQ96P26 610 aa7.55□□□□□ -1.2
TARDBP-216ENST00000614494 TWNKQ96RR1 684 aa7.55□□□□□ -1.2
TARDBP-216ENST00000614494 BTBD1Q9H0C5 482 aa7.55□□□□□ -1.2
TARDBP-216ENST00000614494 LHX5Q9H2C1 402 aa7.55□□□□□ -1.2
TARDBP-216ENST00000614494 APOBEC3GQ9HC16 384 aaKnown RBP7.55□□□□□ -1.2
TARDBP-216ENST00000614494 DKK4Q9UBT3 224 aa7.55□□□□□ -1.2
TARDBP-216ENST00000614494 TSPAN16Q9UKR8 245 aa7.55□□□□□ -1.2
TARDBP-216ENST00000614494 BOLA1Q9Y3E2 137 aa7.55□□□□□ -1.2
TARDBP-216ENST00000614494 CACNA1EQ15878 2313 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 C1QTNF9BB2RNN3 333 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 RIOK3O14730 519 aaKnown RBP7.54□□□□□ -1.2
TARDBP-216ENST00000614494 PAPSS1O43252 624 aaPredicted RBP7.54□□□□□ -1.2
TARDBP-216ENST00000614494 MED7O43513 233 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 PCDHGA12O60330 932 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 MAGEC1O60732 1142 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 FGFR1OPO95684 399 aaKnown RBP7.54□□□□□ -1.2
TARDBP-216ENST00000614494 KLKB1P03952 638 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 C1QTNF9P0C862 333 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 SLC2A3P11169 496 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 PABPC1P11940 636 aaKnown RBP7.54□□□□□ -1.2
TARDBP-216ENST00000614494 CD59P13987 128 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 CD19P15391 556 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 POLR2EP19388 210 aaKnown RBP7.54□□□□□ -1.2
TARDBP-216ENST00000614494 HOXD9P28356 352 aaPredicted RBP7.54□□□□□ -1.2
TARDBP-216ENST00000614494 NNMTP40261 264 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 IL12RB1P42701 662 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 WASP42768 502 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 CCT8P50990 548 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 GCNT1Q02742 428 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 SLC12A1Q13621 1099 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 GEN1Q17RS7 908 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 GOLGA7BQ2TAP0 167 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 FOXD4L6Q3SYB3 417 aaPredicted RBP7.54□□□□□ -1.2
TARDBP-216ENST00000614494 FNDC3BQ53EP0 1204 aaKnown RBP7.54□□□□□ -1.2
TARDBP-216ENST00000614494 ZNF394Q53GI3 561 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 SLC45A4Q5BKX6 768 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 DCAF12L1Q5VU92 463 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 KIAA1211LQ6NV74 962 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 LCLAT1Q6UWP7 414 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 FOXD4L3Q6VB84 417 aaPredicted RBP7.54□□□□□ -1.2
TARDBP-216ENST00000614494 ENOSF1Q7L5Y1 443 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 DSG4Q86SJ6 1040 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 FMNL3Q8IVF7 1028 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 ZC3H3Q8IXZ2 948 aaKnown RBP7.54□□□□□ -1.2
TARDBP-216ENST00000614494 OXR1Q8N573 874 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 STK32AQ8WU08 396 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 SMARCE1Q969G3 411 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 IGSF8Q969P0 613 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 DHTKD1Q96HY7 919 aaPredicted RBP7.54□□□□□ -1.2
TARDBP-216ENST00000614494 ACOX2Q99424 681 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 GPR174Q9BXC1 333 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 MKRN2Q9H000 416 aaKnown RBP7.54□□□□□ -1.2
TARDBP-216ENST00000614494 TMEM245Q9H330 911 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 MMRN2Q9H8L6 949 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 TM7SF3Q9NS93 570 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 GGA2Q9UJY4 613 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 FZD4Q9ULV1 537 aa7.54□□□□□ -1.2
TARDBP-216ENST00000614494 PCDH15Q96QU1 1955 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 TARSL2A2RTX5 802 aaKnown RBP7.53□□□□□ -1.2
TARDBP-216ENST00000614494 LRRC72A6NJI9 287 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 O00370 1275 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 HYAL3O43820 417 aaPredicted RBP7.53□□□□□ -1.2
TARDBP-216ENST00000614494 SEMA4FO95754 770 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 IGLV3-27P01718 113 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 APOEP02649 317 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 SRPRAP08240 638 aaKnown RBP7.53□□□□□ -1.2
TARDBP-216ENST00000614494 C1SP09871 688 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 FTH1P19P0C7X4 201 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 CD27P26842 260 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 HNF1BP35680 557 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 COPAP53621 1224 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 DAOAP59103 153 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 NUCB2P80303 420 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 SULT2A1Q06520 285 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 CCDC15Q0P6D6 951 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 ADIGQ0VDE8 80 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 CDH18Q13634 790 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 BECN1Q14457 450 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 CNGA2Q16280 664 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 RNF219Q5W0B1 726 aaPredicted RBP7.53□□□□□ -1.2
TARDBP-216ENST00000614494 BSPRYQ5W0U4 402 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 CHST9Q7L1S5 443 aa7.53□□□□□ -1.2
TARDBP-216ENST00000614494 ADAT2Q7Z6V5 191 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms