RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 C11orf74Q86VG3 221 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 ACTRT2Q8TDY3 377 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 ZKSCAN4Q969J2 545 aaPredicted RBP17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 ACTR8Q9H981 624 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 PHGDHO43175 533 aaKnown RBP17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 SMNDC1O75940 238 aaKnown RBP eCLIP17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 URODP06132 367 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 PTPN3P26045 913 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 RPS7P62081 194 aaKnown RBP17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 TMEM119Q4V9L6 283 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 C11orf96Q7Z7L8 435 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 SLC47A2Q86VL8 602 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 FAM45AQ8TCE6 357 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 HPS4Q9NQG7 708 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 GDF3Q9NR23 364 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 ATAD3AQ9NVI7 634 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 CHORDC1Q9UHD1 332 aaPredicted RBP17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 VPS28Q9UK41 221 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 GNG14A0A1W2PPG7 69 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 H3BMM5 538 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 KATNA1O75449 491 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 PDE9AO76083 593 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 ZNF682O95780 498 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 EIF2B2P49770 351 aaKnown RBP17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 AMPD2Q01433 879 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 VAC14Q08AM6 782 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 NR6A1Q15406 480 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 SKIV2LQ15477 1246 aaKnown RBP17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 ARMC3Q5W041 872 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 CCDC149Q6ZUS6 474 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 TMC3Q7Z5M5 1100 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 ZNF557Q8N988 423 aaPredicted RBP17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 C9orf16Q9BUW7 83 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 CLEC4MQ9H2X3 399 aaPredicted RBP17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 SYNDIG1Q9H7V2 258 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 GPRC5CQ9NQ84 441 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 NDUFAF1Q9Y375 327 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 SLC12A8A0AV02 714 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 ZNF7P17097 686 aaPredicted RBP17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 N4BP2L1Q5TBK1 243 aaPredicted RBP17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 CARNMT1Q8N4J0 409 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 LACRTQ9GZZ8 138 aa17.81■□□□□ 0.44
HMGXB3-206ENST00000613459 TBKBP1A7MCY6 615 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 TNFRSF8P28908 595 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 SNX30Q5VWJ9 437 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 ZCCHC7Q8N3Z6 543 aaKnown RBP17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 ERI2A8K979 691 aaKnown RBP17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 LDLRP01130 860 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 GLRBP48167 497 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 TKTL1P51854 596 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 SLC9A5Q14940 896 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 SAMD4BQ5PRF9 694 aaKnown RBP17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 SWT1Q5T5J6 900 aaKnown RBP17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 SERPINB11Q96P15 392 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 KLK14Q9P0G3 267 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 PEX1O43933 1283 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 CPSF4O95639 269 aaKnown RBP17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 PSMB9P28065 219 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 CNGA2Q16280 664 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 HTR3CQ8WXA8 447 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 SLC25A23Q9BV35 468 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 OSGEPQ9NPF4 335 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 IFNGR2P38484 337 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 HALP42357 657 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 KCNMB4Q86W47 210 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 KRT73Q86Y46 540 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 CENPTQ96BT3 561 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 CYP4F12Q9HCS2 524 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 NT5MQ9NPB1 228 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 MIEF1Q9NQG6 463 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 MAN1C1Q9NR34 630 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 GPATCH2LQ9NWQ4 482 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 VPS51Q9UID3 782 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 DUSP10Q9Y6W6 482 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 IL12RB1P42701 662 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 CLCN3P51790 818 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 C21orf59P57076 290 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 ATP1A4Q13733 1029 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 NDUFA5Q16718 116 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 PDZK1Q5T2W1 519 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 ILDR2Q71H61 639 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 FAM131BQ86XD5 332 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 OMA1Q96E52 524 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 RTFDC1Q9BY42 306 aaPredicted RBP17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 TAS2R13Q9NYV9 303 aa17.8■□□□□ 0.44
HMGXB3-206ENST00000613459 FSBPO95073 299 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 RAG1P15918 1043 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 XRCC4Q13426 336 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 FBXO39Q8N4B4 442 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 RBM22Q9NW64 420 aaKnown RBP eCLIP17.79■□□□□ 0.445e-12■■■■■ 55.7
HMGXB3-206ENST00000613459 ADPRHL2Q9NX46 363 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 UBAP1Q9NZ09 502 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 PADI4Q9UM07 663 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 FRMPD4Q14CM0 1322 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 IFRD1O00458 451 aaPredicted RBP17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 RPN2P04844 631 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 FYNP06241 537 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 ANXA6P08133 673 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 FGFR2P21802 821 aa17.79■□□□□ 0.44
HMGXB3-206ENST00000613459 PPIDQ08752 370 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms