RNA–Protein interactions for RNA: ENST00000606377.6

PAX6-231, Transcript of paired box 6, human

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 6,901 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-231	ENST00000606377	POPDC2	Q9HBU9	364 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	RGS18	Q9NS28	235 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	CYP39A1	Q9NYL5	469 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	SPATA31D1	Q6ZQQ2	1576 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	RNF103	O00237	685 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	IGFBP4	P22692	258 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	TUFM	P49411	452 aa	Known RBP	10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	RPS7	P62081	194 aa	Known RBP	10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	KLC1	Q07866	573 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	WSCD1	Q658N2	575 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	SEMA4D	Q92854	862 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	AGXT2	Q9BYV1	514 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	ULBP1	Q9BZM6	244 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	NCKIPSD	Q9NZQ3	722 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	RAD54B	Q9Y620	910 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	PDZK1P1	A8MUH7	402 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	GLI1	P08151	1106 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	CYP3A4	P08684	503 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	PTEN	P60484	403 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	NR6A1	Q15406	480 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	ALF	Q53S48	1182 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	TMEM159	Q96B96	161 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	FAM163A	Q96GL9	167 aa	Predicted RBP	10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	APBA2	Q99767	749 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	DUSP9	Q99956	384 aa	Known RBP	10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	GTF2A1L	Q9UNN4	478 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	NRCAM	Q92823	1304 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	UBXN8	O00124	270 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	KCNK1	O00180	336 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	DEAF1	O75398	565 aa	Predicted RBP	10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	LTF	P02788	710 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	HMGCR	P04035	888 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	PGAM1	P18669	254 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	BCL2L1	Q07817	233 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	TGM3	Q08188	693 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	FKBP1C	Q5VVH2	108 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	MTMR8	Q96EF0	704 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	ZDHHC6	Q9H6R6	413 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	SLC40A1	Q9NP59	571 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	KRT84	Q9NSB2	600 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	BLOC1S4	Q9NUP1	217 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	TRPC4	Q9UBN4	977 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	SOX13	Q9UN79	622 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	DAB1	O75553	588 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	BAIAP3	O94812	1187 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	GSTM1	P09488	218 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	POLR2E	P19388	210 aa	Known RBP	10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	MIP	P30301	263 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	TTC33	Q6PID6	262 aa	Predicted RBP	10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	RBM43	Q6ZSC3	357 aa	Known RBP	10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	SYTL1	Q8IYJ3	562 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	CATSPER2	Q96P56	530 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	LZTS1	Q9Y250	596 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	HES2	Q9Y543	173 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	SALL3	Q9BXA9	1300 aa		10.2	□□□□□ -0.78
PAX6-231	ENST00000606377	PTPN1	P18031	435 aa	Known RBP	10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	TNNI3	P19429	210 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	SLC1A6	P48664	564 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	CSTF3	Q12996	717 aa	Known RBP	10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	MTA1	Q13330	715 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	SPANXN3	Q5MJ09	141 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	MFSD7	Q6UXD7	560 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	BNC2	Q6ZN30	1099 aa	Predicted RBP	10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	MOB2	Q70IA6	237 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	LRRC8D	Q7L1W4	858 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	MTDH	Q86UE4	582 aa	Known RBP	10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	MRPL17	Q9NRX2	175 aa	Known RBP	10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	SLC24A2	Q9UI40	661 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	ARHGAP23	Q9P227	1491 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	PSMD12	O00232	456 aa	Predicted RBP	10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	MRPS6	P82932	125 aa	Known RBP	10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	RCN1	Q15293	331 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	TMEM86A	Q8N2M4	240 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	PAWR	Q96IZ0	340 aa	Known RBP	10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	C10orf88	Q9H8K7	445 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	ABCC13	Q9NSE7	274 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	UBA2	Q9UBT2	640 aa	Predicted RBP	10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	TMCC3	Q9ULS5	477 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	PCDHA3	Q9Y5H8	950 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	TM9SF1	O15321	606 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	CCDC159	P0C7I6	412 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	ATP6V1B2	P21281	511 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	POU1F1	P28069	291 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	FMO4	P31512	558 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	CHRNB3	Q05901	458 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	KIAA0319L	Q8IZA0	1049 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	ZNF786	Q8N393	782 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	NAALADL1	Q9UQQ1	740 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	NCKAP1	Q9Y2A7	1128 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	KPNA3	O00505	521 aa	Predicted RBP	10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	SCAMP3	O14828	347 aa	Known RBP	10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	SERPINI2	O75830	405 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	HOXC6	P09630	235 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	OR56A5	P0C7T3	313 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	CYP2A6	P11509	494 aa	Predicted RBP	10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	CCL23	P55773	120 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	ITIH4	Q14624	930 aa		10.19	□□□□□ -0.78
PAX6-231	ENST00000606377	PREPL	Q4J6C6	727 aa	Predicted RBP	10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms