RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 IRF1P10914 325 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 PFKLP17858 780 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 ANXA13P27216 316 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 ACTN2P35609 894 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 CSRP3P50461 194 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 MXI1P50539 228 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 ZNF75DP51815 510 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 AFF3P51826 1226 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 TMPRSS3P57727 454 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 TFAMQ00059 246 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 KCNMA1Q12791 1236 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 RTP5Q14D33 572 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 FUT11Q495W5 492 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 SCARA3Q6AZY7 606 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 DENND5BQ6ZUT9 1274 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 ERICH1Q86X53 443 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 DDX42Q86XP3 938 aaKnown RBP eCLIP14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 TMEM25Q86YD3 366 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 C1orf127Q8N9H9 656 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 MRFAP1L1Q96HT8 127 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 ANKRD36BP1Q96IX9 119 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 MTMR12Q9C0I1 747 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 NRSN2Q9GZP1 204 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 SIX4Q9UIU6 781 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 SIK3Q9Y2K2 1263 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 SH3BP1Q9Y3L3 701 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 STARD13Q9Y3M8 1113 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 TEX15Q9BXT5 2789 aa14.6□□□□□ -0.07
SHKBP1-218ENST00000598907 E2F8A0AVK6 867 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 PRRT4C9JH25 899 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 NEDD8-MDP1E9PL57 170 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 ENC1O14682 589 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 TMEM191BP0C7N4 346 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 BDNFP23560 247 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 POLR2BP30876 1174 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 UBXN1Q04323 297 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 STARD3Q14849 445 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 COLEC12Q5KU26 742 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 FKBP15Q5T1M5 1219 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 GATAD2AQ86YP4 633 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 ADGRF2Q8IZF7 708 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 KIAA1958Q8N8K9 716 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 EHBP1Q8NDI1 1231 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 FBXL13Q8NEE6 735 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 TAS1R2Q8TE23 839 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 SEMA4DQ92854 862 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 FUBP3Q96I24 572 aaKnown RBP eCLIP14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 TRIM5Q9C035 493 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 MKRN2Q9H000 416 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 MMRN2Q9H8L6 949 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 SPHK2Q9NRA0 654 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 USP36Q9P275 1121 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 NXF1Q9UBU9 619 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 ITGA11Q9UKX5 1188 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 ANKRD6Q9Y2G4 727 aa14.59□□□□□ -0.07
SHKBP1-218ENST00000598907 MYLKQ15746 1914 aa14.58□□□□□ -0.07
SHKBP1-218ENST00000598907 HLA-DRAP01903 254 aa14.58□□□□□ -0.08
SHKBP1-218ENST00000598907 NTRK1P04629 796 aa14.58□□□□□ -0.08
SHKBP1-218ENST00000598907 MAGEA11P43364 429 aa14.58□□□□□ -0.08
SHKBP1-218ENST00000598907 TPMTP51580 245 aa14.58□□□□□ -0.08
SHKBP1-218ENST00000598907 CYP27A1Q02318 531 aa14.58□□□□□ -0.08
SHKBP1-218ENST00000598907 TAF10Q12962 218 aa14.58□□□□□ -0.08
SHKBP1-218ENST00000598907 TEAD4Q15561 434 aa14.58□□□□□ -0.08
SHKBP1-218ENST00000598907 TBC1D25Q3MII6 688 aa14.58□□□□□ -0.08
SHKBP1-218ENST00000598907 BROXQ5VW32 411 aa14.58□□□□□ -0.08
SHKBP1-218ENST00000598907 GBP6Q6ZN66 633 aa14.58□□□□□ -0.08
SHKBP1-218ENST00000598907 WBP1Q96G27 269 aa14.58□□□□□ -0.08
SHKBP1-218ENST00000598907 CNDP2Q96KP4 475 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-218ENST00000598907 RAB20Q9NX57 234 aa14.58□□□□□ -0.08
SHKBP1-218ENST00000598907 COL12A1Q99715 3063 aa14.58□□□□□ -0.08
SHKBP1-218ENST00000598907 TP53BP1Q12888 1972 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 PES1O00541 588 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 PCDHGA12O60330 932 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 ADCY5O95622 1261 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 STAU1O95793 577 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 ITGB3P05106 788 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 TPM3P06753 285 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 SLC9A1P19634 815 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 PON1P27169 355 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 PCSK1P29120 753 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 PNPLA4P41247 253 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 RBP5P82980 135 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 CETN1Q12798 172 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 NCOA4Q13772 614 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 SYCP1Q15431 976 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 EXOC3L4Q17RC7 722 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 C4orf50Q6ZRC1 276 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 VSTM4Q8IW00 320 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 C1orf216Q8TAB5 229 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 BHMTQ93088 406 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 IGSF8Q969P0 613 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 WBP2Q969T9 261 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 OTUB2Q96DC9 234 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 SPATA17Q96L03 361 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 SYT15Q9BQS2 421 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 CRACR2AQ9BSW2 395 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 XYLT2Q9H1B5 865 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 VRTNQ9H8Y1 702 aa14.57□□□□□ -0.08
SHKBP1-218ENST00000598907 TM9SF3Q9HD45 589 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms