RNA–Protein interactions for RNA: ENST00000584692.1

RHOT1-216, Transcript of ras homolog family member T1, human

TSL 2

Gene RHOT1, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOT1-216	ENST00000584692	VPS41	P49754	854 aa		5.56	□□□□□ -1.52
RHOT1-216	ENST00000584692	YPEL5	P62699	121 aa		5.56	□□□□□ -1.52
RHOT1-216	ENST00000584692	GHRHR	Q02643	423 aa		5.56	□□□□□ -1.52
RHOT1-216	ENST00000584692	LCE1E	Q5T753	118 aa		5.56	□□□□□ -1.52
RHOT1-216	ENST00000584692	SLC2A7	Q6PXP3	512 aa		5.56	□□□□□ -1.52
RHOT1-216	ENST00000584692	DEF8	Q6ZN54	512 aa		5.56	□□□□□ -1.52
RHOT1-216	ENST00000584692	RFX6	Q8HWS3	928 aa		5.56	□□□□□ -1.52
RHOT1-216	ENST00000584692	CNGA4	Q8IV77	575 aa		5.56	□□□□□ -1.52
RHOT1-216	ENST00000584692	WASF1	Q92558	559 aa		5.56	□□□□□ -1.52
RHOT1-216	ENST00000584692	CELF1	Q92879	486 aa	Known RBP	5.56	□□□□□ -1.52
RHOT1-216	ENST00000584692	MLXIPL	Q9NP71	852 aa		5.56	□□□□□ -1.52
RHOT1-216	ENST00000584692	PCDHB7	Q9Y5E2	793 aa		5.56	□□□□□ -1.52
RHOT1-216	ENST00000584692	FAM90A18P	A6NE21	464 aa		5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692	FAM90A16P	A6NEW6	464 aa		5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692	FAM90A9P	A6NNJ1	464 aa		5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692	FAM90A5P	A8MXJ8	464 aa		5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692	INPPL1	O15357	1258 aa		5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692	SGPL1	O95470	568 aa		5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692	PLAU	P00749	431 aa		5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692	FAM90A15P	P0C7V4	464 aa		5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692	FAM90A14P	P0C7W9	464 aa		5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692	DMWD	Q09019	674 aa		5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692	CHAF1A	Q13111	956 aa	Predicted RBP	5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692	GLE1	Q53GS7	698 aa	Known RBP	5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692	RBM44	Q6ZP01	1051 aa	Known RBP	5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692		Q8N9P0	234 aa	Predicted RBP	5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692	BCAS4	Q8TDM0	211 aa		5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692	TRMT61A	Q96FX7	289 aa	Known RBP	5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692	SIGLEC11	Q96RL6	698 aa		5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692	RPS6KC1	Q96S38	1066 aa		5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692	RMDN3	Q96TC7	470 aa		5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692	ZBTB1	Q9Y2K1	713 aa		5.55	□□□□□ -1.52
RHOT1-216	ENST00000584692		M0QYT0	321 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	TOP3B	O95985	862 aa	Known RBP	5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	CSTB	P04080	98 aa	Known RBP	5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	ITGA2B	P08514	1039 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	CYP3A4	P08684	503 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	IGFBP2	P18065	325 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	RPS6KB1	P23443	525 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	HOXA7	P31268	230 aa	Predicted RBP	5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	AKT1	P31749	480 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	SOX2	P48431	317 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	CDK7	P50613	346 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	POLE2	P56282	527 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	TLE3	Q04726	772 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	FOXO1	Q12778	655 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	KLF9	Q13886	244 aa	Predicted RBP	5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	TRIP6	Q15654	476 aa	Known RBP	5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	LIN54	Q6MZP7	749 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	C11orf87	Q6NUJ2	197 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	WDR93	Q6P2C0	686 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	VPS37A	Q8NEZ2	397 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	PIGO	Q8TEQ8	1089 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	RPL36AL	Q969Q0	106 aa	Known RBP	5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	COQ8B	Q96D53	544 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	ZNF778	Q96MU6	729 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	RTKN	Q9BST9	563 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	PI4KB	Q9UBF8	816 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	CNTN6	Q9UQ52	1028 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	B3GNT3	Q9Y2A9	372 aa		5.54	□□□□□ -1.52
RHOT1-216	ENST00000584692	ACKR2	O00590	384 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	CNOT3	O75175	753 aa	Known RBP	5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	USP12	O75317	370 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	KAT7	O95251	611 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	LARGE1	O95461	756 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	ENO1	P06733	434 aa	Known RBP	5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	PNLIPRP1	P54315	467 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	FOXL2	P58012	376 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	RPL15	P61313	204 aa	Known RBP	5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	OS9	Q13438	667 aa	Predicted RBP	5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	BIRC2	Q13490	618 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	BLMH	Q13867	455 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692		Q4G0T1	1027 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	EARS2	Q5JPH6	523 aa	Known RBP	5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	ZNF425	Q6IV72	752 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	CACNA2D3	Q8IZS8	1091 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	ENAH	Q8N8S7	591 aa	Predicted RBP	5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	ATG16L2	Q8NAA4	619 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	STT3B	Q8TCJ2	826 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	WIPF2	Q8TF74	440 aa	Predicted RBP	5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	PIGK	Q92643	395 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	CUL5	Q93034	780 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	REXO5	Q96IC2	774 aa	Known RBP	5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	SLC29A3	Q9BZD2	475 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	ERVK-5	Q9HDB9	667 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	PRDM8	Q9NQV8	689 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	TUBA8	Q9NY65	449 aa	Predicted RBP	5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	DACT1	Q9NYF0	836 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	HERC5	Q9UII4	1024 aa	Known RBP	5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	COMMD10	Q9Y6G5	202 aa		5.53	□□□□□ -1.52
RHOT1-216	ENST00000584692	C2CD4B	A6NLJ0	364 aa		5.52	□□□□□ -1.53
RHOT1-216	ENST00000584692	KIF28P	B7ZC32	967 aa		5.52	□□□□□ -1.53
RHOT1-216	ENST00000584692	TRIM38	O00635	465 aa		5.52	□□□□□ -1.53
RHOT1-216	ENST00000584692	PPP6R2	O75170	966 aa		5.52	□□□□□ -1.53
RHOT1-216	ENST00000584692	CD63	P08962	238 aa		5.52	□□□□□ -1.53
RHOT1-216	ENST00000584692	RFPL3S	P0C7P2	107 aa		5.52	□□□□□ -1.53
RHOT1-216	ENST00000584692	CTSA	P10619	480 aa		5.52	□□□□□ -1.53
RHOT1-216	ENST00000584692	HOXD9	P28356	352 aa	Predicted RBP	5.52	□□□□□ -1.53
RHOT1-216	ENST00000584692	ZNF81	P51508	661 aa		5.52	□□□□□ -1.53
RHOT1-216	ENST00000584692	FAM3B	P58499	235 aa	Predicted RBP	5.52	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms