RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 UBDO15205 165 aa18.33■□□□□ 0.52
ATPAF1-214ENST00000576409 ZNF862O60290 1169 aa18.33■□□□□ 0.52
ATPAF1-214ENST00000576409 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.33■□□□□ 0.52
ATPAF1-214ENST00000576409 SERAC1Q96JX3 654 aa18.33■□□□□ 0.52
ATPAF1-214ENST00000576409 MFSD14AQ96MC6 490 aa18.33■□□□□ 0.52
ATPAF1-214ENST00000576409 GPAMQ9HCL2 828 aa18.33■□□□□ 0.52
ATPAF1-214ENST00000576409 TJP2Q9UDY2 1190 aa18.33■□□□□ 0.52
ATPAF1-214ENST00000576409 BUD23O43709 281 aaKnown RBP18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 ARHGDIAP52565 204 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 RBM44Q6ZP01 1051 aaKnown RBP18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 FAM183BPQ6ZVS7 135 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 KCNMB4Q86W47 210 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 TRAPPC9Q96Q05 1148 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 FICDQ9BVA6 458 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 GPRC5DQ9NZD1 345 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 NDUFA13Q9P0J0 144 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 COL1A1P02452 1464 aaPredicted RBP18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 UGT1A9O60656 530 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 GBE1Q04446 702 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 TBCELQ5QJ74 424 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 WLSQ5T9L3 541 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 MIB1Q86YT6 1006 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 SAMD3Q8N6K7 520 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 NDNQ99608 321 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 THUMPD3Q9BV44 507 aaKnown RBP18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 UGT1A7Q9HAW7 530 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 UGT1A10Q9HAW8 530 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 UGT1A8Q9HAW9 530 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 APOBEC3GQ9HC16 384 aaKnown RBP18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 DDX28Q9NUL7 540 aaKnown RBP18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 HNRNPRO43390 633 aaKnown RBP18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 PEX11AO75192 247 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 TRUB2O95900 331 aaKnown RBP18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 RXRBP28702 533 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 CDKN2BP42772 138 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 SZRD1Q7Z422 152 aa18.32■□□□□ 0.52
ATPAF1-214ENST00000576409 TCRBV7S3A2A0A539 114 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 NDUFS3O75489 264 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 ZBTB17Q13105 803 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 RNASEH2BQ5TBB1 312 aaKnown RBP18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 TRMT10BQ6PF06 316 aaKnown RBP18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 MON1BQ7L1V2 547 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 TFAP2BQ92481 460 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 RCN3Q96D15 328 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 PRDM12Q9H4Q4 367 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 ABCC6O95255 1503 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 TRPC5OSA6NMA1 111 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 M0R3G1 203 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 MAGEB2O15479 319 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 ENDOD1O94919 500 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 ASS1P00966 412 aaKnown RBP18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 LYNP07948 512 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 LRRC38Q5VT99 294 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 MBOAT7Q96N66 472 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 EBF4Q9BQW3 602 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 WDR41Q9HAD4 459 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 LINC00854A0A1B0GVQ3 168 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 B3GAT3O94766 335 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 TMEM63AO94886 807 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 GOT1P17174 413 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 HMOX2P30519 316 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 ACADSBP45954 432 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 ABCE1P61221 599 aaKnown RBP18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 GTF2H3Q13889 308 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 SLC5A9Q2M3M2 681 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 THEM5Q8N1Q8 247 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 LATS2Q9NRM7 1088 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 GON4LQ3T8J9 2241 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 C1orf232A0A0U1RR37 186 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 COX4I1P13073 169 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 CHRM3P20309 590 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 TAF6P49848 677 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 TKTL1P51854 596 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 SH3PXD2AQ5TCZ1 1133 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 ZNF470Q6ECI4 717 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 WDR60Q8WVS4 1066 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 RABGEF1Q9UJ41 708 aa18.31■□□□□ 0.52
ATPAF1-214ENST00000576409 MYH13Q9UKX3 1938 aa18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 PAPSS1O43252 624 aaPredicted RBP18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 DDHD2O94830 711 aa18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 HNRNPLP14866 589 aaKnown RBP eCLIP18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 KCNK10P57789 538 aa18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 NET1Q7Z628 596 aaPredicted RBP18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 CD274Q9NZQ7 290 aa18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 ACKR2O00590 384 aa18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 STRNO43815 780 aa18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 PSMA4P25789 261 aaKnown RBP18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 FOLH1Q04609 750 aa18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 ZNF398Q8TD17 642 aa18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 DDI1Q8WTU0 396 aa18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 SPATA17Q96L03 361 aa18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 EBNA1BP2Q99848 306 aaKnown RBP18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 SLC17A6Q9P2U8 582 aa18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 PRPF4O43172 522 aaKnown RBP eCLIP18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 CHN2P52757 468 aa18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 ADARP55265 1226 aaKnown RBP18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 TGFB2P61812 414 aa18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 C4orf22Q6V702 233 aa18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 ZPBP2Q6X784 338 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms