RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 CYP1A1P04798 512 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-216ENST00000575599 CISD3P0C7P0 127 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 FERP16591 822 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 HOXD9P28356 352 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-216ENST00000575599 GBP1P32455 592 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 KIR2DL1P43626 348 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-216ENST00000575599 GABRB2P47870 512 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 SGSHP51688 502 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 NME3Q13232 169 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 FAM133BQ5BKY9 247 aaKnown RBP13.76□□□□□ -0.21
RPAIN-216ENST00000575599 SPECC1LQ69YQ0 1117 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 NADSYN1Q6IA69 706 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 TRIM72Q6ZMU5 477 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 ASCL5Q7RTU5 278 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 PHLDB2Q86SQ0 1253 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 LONP2Q86WA8 852 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 VSTM4Q8IW00 320 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 IL17RCQ8NAC3 791 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 ZNF397Q8NF99 534 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-216ENST00000575599 TSTD1Q8NFU3 115 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 SLC30A5Q8TAD4 765 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 RNF34Q969K3 372 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 TMA16Q96EY4 203 aaKnown RBP13.76□□□□□ -0.21
RPAIN-216ENST00000575599 PCDHB18PQ96TA0 734 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 C11orf70Q9BRQ4 267 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 NUP58Q9BVL2 599 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 NUCKS1Q9H1E3 243 aaKnown RBP13.76□□□□□ -0.21
RPAIN-216ENST00000575599 XPO7Q9UIA9 1087 aaKnown RBP13.76□□□□□ -0.21
RPAIN-216ENST00000575599 CLEC4EQ9ULY5 219 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 MMP17Q9ULZ9 603 aa13.76□□□□□ -0.21
RPAIN-216ENST00000575599 VPS13AQ96RL7 3174 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 LRRC53A6NM62 1247 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 M0QYT0 321 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 SGK1O00141 431 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 TBL1XO60907 577 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 LILRB5O75023 590 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 APBB3O95704 486 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 CCDC172P0C7W6 258 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 CHRM1P11229 460 aaPredicted RBP13.75□□□□□ -0.21
RPAIN-216ENST00000575599 NOS2P35228 1153 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 SULT1E1P49888 294 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 SRSF5Q13243 272 aaKnown RBP13.75□□□□□ -0.21
RPAIN-216ENST00000575599 TRIM14Q14142 442 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 EOGTQ5NDL2 527 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 EGFLAMQ63HQ2 1017 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 ANKS1BQ7Z6G8 1248 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 BAP1Q92560 729 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 AZIN2Q96A70 460 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 IQCDQ96DY2 449 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 PRICKLE1Q96MT3 831 aaPredicted RBP13.75□□□□□ -0.21
RPAIN-216ENST00000575599 AGPAT1Q99943 283 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 DDX50Q9BQ39 737 aaKnown RBP13.75□□□□□ -0.21
RPAIN-216ENST00000575599 METTL5Q9NRN9 209 aaKnown RBP13.75□□□□□ -0.21
RPAIN-216ENST00000575599 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.75□□□□□ -0.21
RPAIN-216ENST00000575599 STIM2Q9P246 746 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 IMPACTQ9P2X3 320 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 FBXO10Q9UK96 956 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 STAP1Q9ULZ2 295 aa13.75□□□□□ -0.21
RPAIN-216ENST00000575599 TYW5A2RUC4 315 aaKnown RBP13.74□□□□□ -0.21
RPAIN-216ENST00000575599 GFRA2O00451 464 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 LMNAP02545 664 aaKnown RBP13.74□□□□□ -0.21
RPAIN-216ENST00000575599 ABCB4P21439 1286 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 CCR1P32246 355 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 SCNN1AP37088 669 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 MATKP42679 507 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 WASP42768 502 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 NSFP46459 744 aaKnown RBP13.74□□□□□ -0.21
RPAIN-216ENST00000575599 ASIC2Q16515 512 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 CRY1Q16526 586 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 GEN1Q17RS7 908 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 CLEC16AQ2KHT3 1053 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 HSF5Q4G112 596 aaPredicted RBP13.74□□□□□ -0.21
RPAIN-216ENST00000575599 PIK3R6Q5UE93 754 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 RAP1GAP2Q684P5 730 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 ANO7Q6IWH7 933 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 PRR23BQ6ZRT6 265 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 TRMT11Q7Z4G4 463 aaKnown RBP13.74□□□□□ -0.21
RPAIN-216ENST00000575599 CHSY1Q86X52 802 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 CHPFQ8IZ52 775 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 CAMKK1Q8N5S9 505 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 ATP6V0D2Q8N8Y2 350 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 HJURPQ8NCD3 748 aaPredicted RBP13.74□□□□□ -0.21
RPAIN-216ENST00000575599 ERLEC1Q96DZ1 483 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 MYEOVQ96EZ4 313 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 BTN2A3PQ96KV6 586 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 SEMA4AQ9H3S1 761 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.74□□□□□ -0.21
RPAIN-216ENST00000575599 HCN2Q9UL51 889 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 MYO6Q9UM54 1294 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 SLC27A6Q9Y2P4 619 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 ITIH6Q6UXX5 1313 aa13.74□□□□□ -0.21
RPAIN-216ENST00000575599 ADAM23O75077 832 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 SLC2A3P11169 496 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 UNGP13051 313 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-216ENST00000575599 HNRNPLP14866 589 aaKnown RBP eCLIP13.73□□□□□ -0.21
RPAIN-216ENST00000575599 TFE3P19532 575 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-216ENST00000575599 TACR2P21452 398 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 MMP8P22894 467 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 HOXA6P31267 233 aa13.73□□□□□ -0.21
RPAIN-216ENST00000575599 FLT3P36888 993 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms