RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 HEY1Q9Y5J3 304 aa14.82□□□□□ -0.04
SMG6-215ENST00000574501 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.81□□□□□ -0.04
SMG6-215ENST00000574501 RBM47A0AV96 593 aaKnown RBP14.81□□□□□ -0.04
SMG6-215ENST00000574501 ARHGEF37A1IGU5 675 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 SERPINB7O75635 380 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 CSPG5O95196 566 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 AMHP03971 560 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 RALBP11234 206 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 MYL4P12829 197 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 ENO3P13929 434 aaPredicted RBP14.81□□□□□ -0.04
SMG6-215ENST00000574501 ZFXP17010 805 aaPredicted RBP14.81□□□□□ -0.04
SMG6-215ENST00000574501 RBL1P28749 1068 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 GRIA1P42261 906 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 PHKA2P46019 1235 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 RXRGP48443 463 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 ALDH3B2P48448 385 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 HSPA13P48723 471 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 ZNF132P52740 706 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 PRKG1Q13976 671 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 CEACAM7Q14002 265 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 NOMO1Q15155 1222 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 TGFBIQ15582 683 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 PTPN20Q4JDL3 420 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 RAB6CQ53S08 254 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 ZFP1Q6P2D0 407 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 BNC2Q6ZN30 1099 aaPredicted RBP14.81□□□□□ -0.04
SMG6-215ENST00000574501 CLVS1Q8IUQ0 354 aaPredicted RBP14.81□□□□□ -0.04
SMG6-215ENST00000574501 LZTR1Q8N653 840 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 MOCOSQ96EN8 888 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 PAIP1Q9H074 479 aaKnown RBP14.81□□□□□ -0.04
SMG6-215ENST00000574501 RAB6CQ9H0N0 254 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 ACSS2Q9NR19 701 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 ZNHIT2Q9UHR6 403 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 NEMP1O14524 444 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 H6PDO95479 791 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 CCNE2O96020 404 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 SERPINB2P05120 415 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 ZNF26P17031 533 aaPredicted RBP14.81□□□□□ -0.04
SMG6-215ENST00000574501 CDH6P55285 790 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 MRPS9P82933 396 aaKnown RBP14.81□□□□□ -0.04
SMG6-215ENST00000574501 PIGGQ5H8A4 983 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 SH3PXD2AQ5TCZ1 1133 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 DENND1BQ6P3S1 775 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 DHRS4L2Q6PKH6 230 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 SCARA5Q6ZMJ2 495 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 FASTKD5Q7L8L6 764 aaKnown RBP14.81□□□□□ -0.04
SMG6-215ENST00000574501 MYO1HQ8N1T3 1032 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 SAMD3Q8N6K7 520 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 KYQ8NBH2 561 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 NTPCRQ9BSD7 190 aaKnown RBP14.81□□□□□ -0.04
SMG6-215ENST00000574501 INO80BQ9C086 356 aaPredicted RBP14.81□□□□□ -0.04
SMG6-215ENST00000574501 COA1Q9GZY4 146 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 ARMC7Q9H6L4 198 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 COQ10BQ9H8M1 238 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 TMEM216Q9P0N5 145 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 PAK5Q9P286 719 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 ARHGAP28Q9P2N2 729 aa14.81□□□□□ -0.04
SMG6-215ENST00000574501 PRSS51A0A1B0GVH4 220 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 TMEM247A6NEH6 219 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 F5H423 210 aaPredicted RBP14.8□□□□□ -0.04
SMG6-215ENST00000574501 PIK3R2O00459 728 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 FBP2O00757 339 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 CBFA2T3O75081 653 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 PRKCGP05129 697 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 CPA3P15088 417 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 ALOX15P16050 662 aaPredicted RBP14.8□□□□□ -0.04
SMG6-215ENST00000574501 PIK3R1P27986 724 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 HOXD12P35452 270 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 HALP42357 657 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 DPP6P42658 865 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 NUP107P57740 925 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 PSMC1P62191 440 aaKnown RBP14.8□□□□□ -0.04
SMG6-215ENST00000574501 MGAT5BQ3V5L5 792 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 TNS4Q8IZW8 715 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 TMEM102Q8N9M5 508 aaPredicted RBP14.8□□□□□ -0.04
SMG6-215ENST00000574501 RNF169Q8NCN4 708 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 RCN3Q96D15 328 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 TMEM79Q9BSE2 394 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 GCOM2Q9BZD3 368 aaPredicted RBP14.8□□□□□ -0.04
SMG6-215ENST00000574501 ZC3H12CQ9C0D7 883 aaKnown RBP14.8□□□□□ -0.04
SMG6-215ENST00000574501 KLC2Q9H0B6 622 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 WDR55Q9H6Y2 383 aaPredicted RBP14.8□□□□□ -0.04
SMG6-215ENST00000574501 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.8□□□□□ -0.04
SMG6-215ENST00000574501 CYTH4Q9UIA0 394 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 USP18Q9UMW8 372 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 NFIBO00712 420 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 GLRA3O75311 464 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 LSM8O95777 96 aaKnown RBP14.8□□□□□ -0.04
SMG6-215ENST00000574501 EIF2AK2P19525 551 aaKnown RBP14.8□□□□□ -0.04
SMG6-215ENST00000574501 PRDX6P30041 224 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 SERPINB9P50453 376 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 CRADDP78560 199 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 CTBSQ01459 385 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 IL23RQ5VWK5 629 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 KRT80Q6KB66 452 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 EPGNQ6UW88 154 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 C16orf89Q6UX73 402 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 TMEM126BQ8IUX1 230 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 SLC15A3Q8IY34 581 aa14.8□□□□□ -0.04
SMG6-215ENST00000574501 CMASQ8NFW8 434 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms