RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 PCDHGA1Q9Y5H4 931 aa5.57□□□□□ -1.52
TRIM25-208ENST00000574234 NPFFR2Q9Y5X5 522 aa5.57□□□□□ -1.52
TRIM25-208ENST00000574234 FBN3Q75N90 2809 aa5.57□□□□□ -1.52
TRIM25-208ENST00000574234 CRYBG3Q68DQ2 2970 aa5.57□□□□□ -1.52
TRIM25-208ENST00000574234 SPTBN1Q01082 2364 aaKnown RBP5.57□□□□□ -1.52
TRIM25-208ENST00000574234 A0A1B0GTW7 788 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 TMEM150BA6NC51 233 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 hCG_1984214I3L0E3 225 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 SUV39H1O43463 412 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 PLEKHA8P1O95397 391 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 LTFP02788 710 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 C1SP09871 688 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 HNRNPLP14866 589 aaKnown RBP eCLIP5.56□□□□□ -1.52
TRIM25-208ENST00000574234 JUPP14923 745 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 ITIH2P19823 946 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 CIITAP33076 1130 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 MATKP42679 507 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 MECP2P51608 486 aaKnown RBP5.56□□□□□ -1.52
TRIM25-208ENST00000574234 CLCNKBP51801 687 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 KRT85P78386 507 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 MBTD1Q05BQ5 628 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 SOX4Q06945 474 aaPredicted RBP5.56□□□□□ -1.52
TRIM25-208ENST00000574234 MYO1EQ12965 1108 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 NFATC3Q12968 1075 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 TRDNQ13061 729 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 MXD4Q14582 209 aaPredicted RBP5.56□□□□□ -1.52
TRIM25-208ENST00000574234 GRM3Q14832 879 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 ODF1Q14990 250 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 TESK1Q15569 626 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 NAIF1Q69YI7 327 aaPredicted RBP5.56□□□□□ -1.52
TRIM25-208ENST00000574234 DHRS13Q6UX07 377 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 ANO5Q75V66 913 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 HEATR3Q7Z4Q2 680 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 MTDHQ86UE4 582 aaKnown RBP5.56□□□□□ -1.52
TRIM25-208ENST00000574234 SLC41A1Q8IVJ1 513 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 DMRTC2Q8IXT2 367 aaPredicted RBP5.56□□□□□ -1.52
TRIM25-208ENST00000574234 ZNF713Q8N859 430 aaPredicted RBP5.56□□□□□ -1.52
TRIM25-208ENST00000574234 CLRN3Q8NCR9 226 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 PCDH19Q8TAB3 1148 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 OTUD7AQ8TE49 926 aaPredicted RBP5.56□□□□□ -1.52
TRIM25-208ENST00000574234 CHTF18Q8WVB6 975 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 RNF141Q8WVD5 230 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 PSMG2Q969U7 264 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 LENG9Q96B70 501 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 SH2D3AQ9BRG2 576 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 ECT2Q9H8V3 914 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 CPNE5Q9HCH3 593 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 PTPRHQ9HD43 1115 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 STARD5Q9NSY2 213 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 BCCIPQ9P287 314 aaKnown RBP eCLIP5.56□□□□□ -1.52
TRIM25-208ENST00000574234 RCAN3Q9UKA8 241 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 MAN2B2Q9Y2E5 1009 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 ZKSCAN5Q9Y2L8 839 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 CELSR2Q9HCU4 2923 aa5.56□□□□□ -1.52
TRIM25-208ENST00000574234 CENPEQ02224 2701 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 LRRK1Q38SD2 2015 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 IGHV1OR15-9A0A0B4J2B8 117 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 INO80B-WBP1J3KQ70 363 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 RNGTTO60942 597 aaKnown RBP5.55□□□□□ -1.52
TRIM25-208ENST00000574234 ZNF217O75362 1048 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 RECQL4O94761 1208 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 ARSAP15289 507 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 DDX6P26196 483 aaKnown RBP eCLIP5.55□□□□□ -1.52
TRIM25-208ENST00000574234 U2AF2P26368 475 aaKnown RBP eCLIP5.55□□□□□ -1.523e-38■■■■□ 24.4
TRIM25-208ENST00000574234 ELAVL4P26378 380 aaKnown RBP5.55□□□□□ -1.52
TRIM25-208ENST00000574234 GABRR2P28476 465 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 CDC25CP30307 473 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 GRK6P43250 576 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 BRCC3P46736 316 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 ALDH1A3P47895 512 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 USP11P51784 963 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 ADCY7P51828 1080 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 NAPAP54920 295 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 ARPP19P56211 112 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 SESN3P58005 492 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 OCRLQ01968 901 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 GALEQ14376 348 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 ZNF268Q14587 947 aaPredicted RBP5.55□□□□□ -1.52
TRIM25-208ENST00000574234 DUOXA2Q1HG44 320 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 GRAMD1BQ3KR37 738 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 TMEM177Q53S58 311 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 COBLL1Q53SF7 1204 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 INO80DQ53TQ3 878 aaPredicted RBP5.55□□□□□ -1.52
TRIM25-208ENST00000574234 PRR16Q569H4 304 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 WDR45BQ5MNZ6 344 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 EOGTQ5NDL2 527 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 ACBD5Q5T8D3 534 aaPredicted RBP5.55□□□□□ -1.52
TRIM25-208ENST00000574234 ZNF280DQ6N043 979 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 CC2D1AQ6P1N0 951 aaPredicted RBP5.55□□□□□ -1.52
TRIM25-208ENST00000574234 LETMD1Q6P1Q0 360 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 B3GNT9Q6UX72 402 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 DYMQ7RTS9 669 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 DNAJB7Q7Z6W7 309 aaPredicted RBP5.55□□□□□ -1.52
TRIM25-208ENST00000574234 CDH24Q86UP0 819 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 ITIH5Q86UX2 942 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 TTC30AQ86WT1 665 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 SMYD4Q8IYR2 804 aaPredicted RBP5.55□□□□□ -1.52
TRIM25-208ENST00000574234 CMTM8Q8IZV2 173 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 TRIML1Q8N9V2 468 aa5.55□□□□□ -1.52
TRIM25-208ENST00000574234 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms