RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 PLK2Q9NYY3 685 aa9.75□□□□□ -0.85
NPLOC4-210ENST00000572824 IL37Q9NZH6 218 aa9.75□□□□□ -0.85
NPLOC4-210ENST00000572824 ZMYM5Q9UJ78 669 aa9.75□□□□□ -0.85
NPLOC4-210ENST00000572824 MMP17Q9ULZ9 603 aa9.75□□□□□ -0.85
NPLOC4-210ENST00000572824 STARD13Q9Y3M8 1113 aa9.75□□□□□ -0.85
NPLOC4-210ENST00000572824 CKAP5Q14008 2032 aa9.75□□□□□ -0.85
NPLOC4-210ENST00000572824 CHD6Q8TD26 2715 aa9.75□□□□□ -0.85
NPLOC4-210ENST00000572824 ZFYVE26Q68DK2 2539 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 A0A1W2PQH9 124 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 TCRBV21S2A2A0A5A6 115 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 BCLAF3A2AJT9 711 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 TULP2O00295 520 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 GHRHP01286 108 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 HSP90AA1P07900 732 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 ACPPP15309 386 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 CRY1Q16526 586 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 ZNF394Q53GI3 561 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 PERM1Q5SV97 790 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 KIAA1211LQ6NV74 962 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 TPGS1Q6ZTW0 290 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 TMEFF1Q8IYR6 380 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 CAMKK1Q8N5S9 505 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 C12orf50Q8NA57 414 aaPredicted RBP9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 NDRG1Q92597 394 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 SMARCD1Q96GM5 515 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 BTBD6Q96KE9 485 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 SLITRK1Q96PX8 696 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 EDEM2Q9BV94 578 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 ARHGEF4Q9NR80 690 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 RAD54BQ9Y620 910 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 KNL1Q8NG31 2342 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 PCNX2A6NKB5 2137 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 TMEM131Q92545 1883 aa9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 NYNRINQ9P2P1 1898 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-210ENST00000572824 CCDC163A0A0D9SF12 145 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 FAM92AA1XBS5 289 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 C4orf47A7E2U8 309 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 PRRT4C9JH25 899 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 TLR5O60602 858 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 ATG13O75143 517 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 TULP3O75386 442 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 ZNF16P17020 682 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 NR2F2P24468 414 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 ATICP31939 592 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 DHPSP49366 369 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 PMS1P54277 932 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 ANO4Q32M45 955 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 FBXO43Q4G163 708 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 ZCWPW2Q504Y3 356 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 C10orf76Q5T2E6 689 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 HECTD3Q5T447 861 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 PSAPL1Q6NUJ1 521 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 SCD5Q86SK9 330 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 OLIG1Q8TAK6 271 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 CNOT6LQ96LI5 555 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 SPATA32Q96LK8 384 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 PNKPQ96T60 521 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 CD248Q9HCU0 757 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 FRRS1LQ9P0K9 344 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 EBF1Q9UH73 591 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 CLEC4EQ9ULY5 219 aa9.73□□□□□ -0.85
NPLOC4-210ENST00000572824 A0A1W2PP55 124 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 TRIM49BA6NDI0 452 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 WASH3PC4AMC7 463 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 NEDD8-MDP1E9PL57 170 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 PDXKO00764 312 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 CDX4O14627 284 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 ZZEF1O43149 2961 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 RTN3O95197 1032 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 KCNK5O95279 499 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 CAVIN2O95810 425 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 KLKB1P03952 638 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 APODP05090 189 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 HMBSP08397 361 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 GABRG2P18507 467 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 ACO1P21399 889 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 LORP23490 312 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 CMA1P23946 247 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 PMLP29590 882 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 SYKP43405 635 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 VAMP7P51809 220 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 SNRPFP62306 86 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 IRX4P78413 519 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 ATP11AP98196 1134 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 INCA1Q0VD86 236 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 PNOCQ13519 176 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 RNF43Q68DV7 783 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 KRBA2Q6ZNG9 492 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 C20orf204Q6ZNR8 217 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 CHSY3Q70JA7 882 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 CACUL1Q86Y37 369 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 FAM186BQ8IYM0 893 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 ZNF513Q8N8E2 541 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 TERB1Q8NA31 727 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 PIGKQ92643 395 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 PLD4Q96BZ4 506 aa9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 DUSP9Q99956 384 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-210ENST00000572824 RBSNQ9H1K0 784 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms