RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 CLVS1Q8IUQ0 354 aaPredicted RBP7.47□□□□□ -1.21
CDH1-203ENST00000561751 CLYBLQ8N0X4 340 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 CADM3Q8N126 398 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 SVOPQ8N4V2 548 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 SNX31Q8N9S9 440 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 MFSD2AQ8NA29 543 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 LINC00116Q8NCU8 138 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 ETNPPLQ8TBG4 499 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 RAB2BQ8WUD1 216 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 KBTBD7Q8WVZ9 684 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 CDKL2Q92772 493 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 CELF1Q92879 486 aaKnown RBP7.47□□□□□ -1.21
CDH1-203ENST00000561751 CCDC127Q96BQ5 260 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 PNMA5Q96PV4 448 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 ALPK1Q96QP1 1244 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 UHRF1Q96T88 793 aaPredicted RBP7.47□□□□□ -1.21
CDH1-203ENST00000561751 SMARCAD1Q9H4L7 1026 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 CXorf21Q9HAI6 301 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.47□□□□□ -1.21
CDH1-203ENST00000561751 PNPLA8Q9NP80 782 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 OLAHQ9NV23 265 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 PARVAQ9NVD7 372 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 DNAJC28Q9NX36 388 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 BARHL2Q9NY43 387 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 STMN3Q9NZ72 180 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 PCDHGA11Q9Y5H2 935 aa7.47□□□□□ -1.21
CDH1-203ENST00000561751 AFDNP55196 1824 aaKnown RBP7.47□□□□□ -1.21
CDH1-203ENST00000561751 LAMB1P07942 1786 aa7.46□□□□□ -1.21
CDH1-203ENST00000561751 ARHGEF37A1IGU5 675 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 PP2D1A8MPX8 630 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 E7ESA3 106 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 GPR25O00155 361 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 GIPC1O14908 333 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 SHOXO15266 292 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 LPXNO60711 386 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 GMNNO75496 209 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 PRDM1O75626 825 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 MYO1DO94832 1006 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 MT-ND3P03897 115 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 S100BP04271 92 aaPredicted RBP7.46□□□□□ -1.22
CDH1-203ENST00000561751 NAGAP17050 411 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 TGM1P22735 817 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 ADORA1P30542 326 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 L1CAMP32004 1257 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 PSMD8P48556 350 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 HK2P52789 917 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 P2RX3P56373 397 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 NLRP11P59045 1033 aaKnown RBP7.46□□□□□ -1.22
CDH1-203ENST00000561751 ECT2LQ008S8 904 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 IFITM2Q01629 132 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 TAGLNQ01995 201 aaKnown RBP7.46□□□□□ -1.22
CDH1-203ENST00000561751 OCA2Q04671 838 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 RAD51Q06609 339 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 SF3B4Q15427 424 aaKnown RBP eCLIP7.46□□□□□ -1.22
CDH1-203ENST00000561751 FXNQ16595 210 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 KNOP1Q1ED39 458 aaKnown RBP7.46□□□□□ -1.22
CDH1-203ENST00000561751 CDONQ4KMG0 1287 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 KRT80Q6KB66 452 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 FAM117BQ6P1L5 589 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.46□□□□□ -1.22
CDH1-203ENST00000561751 USP43Q70EL4 1123 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 AMIGO2Q86SJ2 522 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 NLRP10Q86W26 655 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 GPBP1Q86WP2 473 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 DNAJC10Q8IXB1 793 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 HACE1Q8IYU2 909 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 MYO1HQ8N1T3 1032 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 DNAJC5GQ8N7S2 189 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 FLAD1Q8NFF5 587 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.46□□□□□ -1.22
CDH1-203ENST00000561751 KRT35Q92764 455 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 E2F7Q96AV8 911 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 CFAP36Q96G28 342 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 MAGED4Q96JG8 741 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 CNBD2Q96M20 576 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 ZKSCAN3Q9BRR0 538 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 TRIM56Q9BRZ2 755 aaKnown RBP7.46□□□□□ -1.22
CDH1-203ENST00000561751 C2orf49Q9BVC5 232 aaPredicted RBP7.46□□□□□ -1.22
CDH1-203ENST00000561751 GON7Q9BXV9 100 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 ZC3H12CQ9C0D7 883 aaKnown RBP7.46□□□□□ -1.22
CDH1-203ENST00000561751 KLHL25Q9H0H3 589 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 THAP2Q9H0W7 228 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 MARCH7Q9H992 704 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 C6orf50Q9HD87 102 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 GDAP2Q9NXN4 497 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 PCSK1NQ9UHG2 260 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 PSME2Q9UL46 239 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 PCDHA12Q9UN75 941 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 COG5Q9UP83 839 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 ZBTB1Q9Y2K1 713 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 RNF11Q9Y3C5 154 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 CCDC88AQ3V6T2 1871 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 AKAP11Q9UKA4 1901 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 MROH5Q6ZUA9 1318 aa7.46□□□□□ -1.22
CDH1-203ENST00000561751 A0A1W2PRU2 124 aa7.45□□□□□ -1.22
CDH1-203ENST00000561751 POC1B-GALNT4F8VUJ3 575 aa7.45□□□□□ -1.22
CDH1-203ENST00000561751 H3BMQ9 156 aa7.45□□□□□ -1.22
CDH1-203ENST00000561751 DYNC1LI2O43237 492 aaPredicted RBP7.45□□□□□ -1.22
CDH1-203ENST00000561751 MSI1O43347 362 aaKnown RBP7.45□□□□□ -1.22
CDH1-203ENST00000561751 DEAF1O75398 565 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms