RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 ALDH1A2O94788 518 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 APODP05090 189 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 PDGFRBP09619 1106 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 ADH5P11766 374 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 IDEP14735 1019 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 ENGP17813 658 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 WARSP23381 471 aaKnown RBP10.26□□□□□ -0.77
SPG11-212ENST00000558790 EIF2DP41214 584 aaKnown RBP10.26□□□□□ -0.77
SPG11-212ENST00000558790 KIR2DL1P43626 348 aaPredicted RBP10.26□□□□□ -0.77
SPG11-212ENST00000558790 ARL4DP49703 201 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 NOP14P78316 857 aaKnown RBP10.26□□□□□ -0.77
SPG11-212ENST00000558790 IFRD2Q12894 506 aaPredicted RBP10.26□□□□□ -0.77
SPG11-212ENST00000558790 LMAN2Q12907 356 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 MYO1EQ12965 1108 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 ALCAMQ13740 583 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 MAPRE1Q15691 268 aaKnown RBP10.26□□□□□ -0.77
SPG11-212ENST00000558790 MDH1BQ5I0G3 518 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 LYSMD4Q5XG99 296 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 SHISA2Q6UWI4 295 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 CBWD2Q8IUF1 395 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 SYT12Q8IV01 421 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 GPD1LQ8N335 351 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 HNRNPLLQ8WVV9 542 aaKnown RBP10.26□□□□□ -0.77
SPG11-212ENST00000558790 CEP295NLQ96MC4 621 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 CLIC6Q96NY7 704 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 PNKPQ96T60 521 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 TRIM56Q9BRZ2 755 aaKnown RBP10.26□□□□□ -0.77
SPG11-212ENST00000558790 NUSAP1Q9BXS6 441 aaKnown RBP10.26□□□□□ -0.77
SPG11-212ENST00000558790 ARHGEF4Q9NR80 690 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 INTS13Q9NVM9 706 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 CFAP97Q9P2B7 532 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 CCDC39Q9UFE4 941 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 CLIC4Q9Y696 253 aa10.26□□□□□ -0.77
SPG11-212ENST00000558790 URB1O60287 2271 aaKnown RBP10.25□□□□□ -0.77
SPG11-212ENST00000558790 A0A087X0B3 334 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 SPAARA0A1B0GVQ0 90 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 SLC9A3R1O14745 358 aaPredicted RBP10.25□□□□□ -0.77
SPG11-212ENST00000558790 PRPF6O94906 941 aaKnown RBP10.25□□□□□ -0.77
SPG11-212ENST00000558790 TNNC2P02585 160 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 PLA2G2AP14555 144 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 TAF10Q12962 218 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 HSF5Q4G112 596 aaPredicted RBP10.25□□□□□ -0.77
SPG11-212ENST00000558790 EOGTQ5NDL2 527 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 EMC10Q5UCC4 262 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 RRAGBQ5VZM2 374 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 RHBDF2Q6PJF5 856 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 SV2BQ7L1I2 683 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 DPH6Q7L8W6 267 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 ADGRG2Q8IZP9 1017 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 KIAA1958Q8N8K9 716 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 MYCBPAPQ8TBZ2 947 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 LRIG1Q96JA1 1093 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 MMS19Q96T76 1030 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 MRPL45Q9BRJ2 306 aaKnown RBP10.25□□□□□ -0.77
SPG11-212ENST00000558790 ZNF518BQ9C0D4 1074 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 DPEP3Q9H4B8 488 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 ZFYVE1Q9HBF4 777 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 OSGEPQ9NPF4 335 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 PILRBQ9UKJ0 227 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 MSRB2Q9Y3D2 182 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 R3HCC1Q9Y3T6 440 aaKnown RBP10.25□□□□□ -0.77
SPG11-212ENST00000558790 NEUROG3Q9Y4Z2 214 aa10.25□□□□□ -0.77
SPG11-212ENST00000558790 NYNRINQ9P2P1 1898 aaKnown RBP10.24□□□□□ -0.77
SPG11-212ENST00000558790 VPS37CA5D8V6 355 aaPredicted RBP10.24□□□□□ -0.77
SPG11-212ENST00000558790 EIF4E1BA6NMX2 242 aaKnown RBP10.24□□□□□ -0.77
SPG11-212ENST00000558790 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.24□□□□□ -0.77
SPG11-212ENST00000558790 CFIP05156 583 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 MBL2P11226 248 aaPredicted RBP10.24□□□□□ -0.77
SPG11-212ENST00000558790 VAMP1P23763 118 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 CD68P34810 354 aaPredicted RBP10.24□□□□□ -0.77
SPG11-212ENST00000558790 STAT6P42226 847 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 GRIA2P42262 883 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 PPP3CCP48454 512 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 SIM1P81133 766 aaPredicted RBP10.24□□□□□ -0.77
SPG11-212ENST00000558790 SEMA3BQ13214 749 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 LY6G5CQ5SRR4 150 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 SLC23A3Q6PIS1 610 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 HS2ST1Q7LGA3 356 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 PIP4P1Q86T03 277 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 DDX42Q86XP3 938 aaKnown RBP eCLIP10.24□□□□□ -0.77
SPG11-212ENST00000558790 WDR49Q8IV35 697 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 STK35Q8TDR2 534 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 UBASH3BQ8TF42 649 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 HPS3Q969F9 1004 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 C8orf48Q96LL4 319 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 SLITRK1Q96PX8 696 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 ELOVL4Q9GZR5 314 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 SLC32A1Q9H598 525 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 SRA1Q9HD15 236 aaKnown RBP10.24□□□□□ -0.77
SPG11-212ENST00000558790 IGSF5Q9NSI5 407 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 PANK4Q9NVE7 773 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 HSPBP1Q9NZL4 362 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 EHD2Q9NZN4 543 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 CALCOCO1Q9P1Z2 691 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 SRPRBQ9Y5M8 271 aaKnown RBP10.24□□□□□ -0.77
SPG11-212ENST00000558790 NBPF19A0A087WUL8 3843 aa10.24□□□□□ -0.77
SPG11-212ENST00000558790 ZNF233A6NK53 670 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 CLDN5O00501 218 aa10.23□□□□□ -0.77
SPG11-212ENST00000558790 KIAA0391O15091 583 aaKnown RBP10.23□□□□□ -0.77
SPG11-212ENST00000558790 COCHO43405 550 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms