RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 ATAD3AQ9NVI7 634 aa11.53□□□□□ -0.56
PCAT29-201ENST00000558411 TRNAU1APQ9NX07 287 aaKnown RBP11.53□□□□□ -0.56
PCAT29-201ENST00000558411 PAK5Q9P286 719 aa11.53□□□□□ -0.56
PCAT29-201ENST00000558411 DCDC2Q9UHG0 476 aa11.53□□□□□ -0.56
PCAT29-201ENST00000558411 IPO11Q9UI26 975 aaKnown RBP11.53□□□□□ -0.56
PCAT29-201ENST00000558411 PCDHB4Q9Y5E5 795 aa11.53□□□□□ -0.56
PCAT29-201ENST00000558411 SLC30A1Q9Y6M5 507 aa11.53□□□□□ -0.56
PCAT29-201ENST00000558411 ARID2Q68CP9 1835 aa11.52□□□□□ -0.56
PCAT29-201ENST00000558411 TRIM64A6NGJ6 449 aa11.52□□□□□ -0.57
PCAT29-201ENST00000558411 XPOTO43592 962 aaKnown RBP11.52□□□□□ -0.57
PCAT29-201ENST00000558411 MCF2P10911 925 aa11.52□□□□□ -0.57
PCAT29-201ENST00000558411 EIF2AK2P19525 551 aaKnown RBP11.52□□□□□ -0.57
PCAT29-201ENST00000558411 DCKP27707 260 aa11.52□□□□□ -0.57
PCAT29-201ENST00000558411 EIF2B2P49770 351 aaKnown RBP11.52□□□□□ -0.57
PCAT29-201ENST00000558411 HERC3Q15034 1050 aa11.52□□□□□ -0.57
PCAT29-201ENST00000558411 INSCQ1MX18 579 aa11.52□□□□□ -0.57
PCAT29-201ENST00000558411 DCAF6Q58WW2 860 aa11.52□□□□□ -0.57
PCAT29-201ENST00000558411 MROH9Q5TGP6 573 aa11.52□□□□□ -0.57
PCAT29-201ENST00000558411 PTF1AQ7RTS3 328 aa11.52□□□□□ -0.57
PCAT29-201ENST00000558411 TRIM50Q86XT4 487 aa11.52□□□□□ -0.57
PCAT29-201ENST00000558411 GMCL1P1Q8NEA9 526 aa11.52□□□□□ -0.57
PCAT29-201ENST00000558411 STARD8Q92502 1023 aa11.52□□□□□ -0.57
PCAT29-201ENST00000558411 TOP1MTQ969P6 601 aa11.52□□□□□ -0.57
PCAT29-201ENST00000558411 LENG8Q96PV6 779 aaPredicted RBP11.52□□□□□ -0.57
PCAT29-201ENST00000558411 RPF2Q9H7B2 306 aaKnown RBP11.52□□□□□ -0.57
PCAT29-201ENST00000558411 QSER1Q2KHR3 1735 aa11.52□□□□□ -0.57
PCAT29-201ENST00000558411 ACOT8O14734 319 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 AIM2O14862 343 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 TPD52L2O43399 206 aaKnown RBP11.51□□□□□ -0.57
PCAT29-201ENST00000558411 UGT1A9O60656 530 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 AVILO75366 819 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 RNASEH2AO75792 299 aaKnown RBP11.51□□□□□ -0.57
PCAT29-201ENST00000558411 OXSR1O95747 527 aaPredicted RBP11.51□□□□□ -0.57
PCAT29-201ENST00000558411 HLA-DRAP01903 254 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 UGT1A6P19224 532 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 GARTP22102 1010 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 UGT1A1P22309 533 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 UGT1A4P22310 534 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 TBXAS1P24557 533 aaPredicted RBP11.51□□□□□ -0.57
PCAT29-201ENST00000558411 PIK3R1P27986 724 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 UGT1A3P35503 534 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 UGT1A5P35504 534 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 MS4A2Q01362 244 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 ZBTB17Q13105 803 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 GRAPQ13588 217 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 ZACNQ401N2 412 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 N4BP2L1Q5TBK1 243 aaPredicted RBP11.51□□□□□ -0.57
PCAT29-201ENST00000558411 TMEM270Q6UE05 265 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 UNC5AQ6ZN44 842 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 EEPD1Q7L9B9 569 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 LYSMD3Q7Z3D4 306 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 TMEM161BQ8NDZ6 487 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 GRAPLQ8TC17 118 aaPredicted RBP11.51□□□□□ -0.57
PCAT29-201ENST00000558411 HGH1Q9BTY7 390 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 ZNF518BQ9C0D4 1074 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 CDH19Q9H159 772 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 COQ10BQ9H8M1 238 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 UGT1A7Q9HAW7 530 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 UGT1A10Q9HAW8 530 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 UGT1A8Q9HAW9 530 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 MRPL40Q9NQ50 206 aaKnown RBP11.51□□□□□ -0.57
PCAT29-201ENST00000558411 DDX4Q9NQI0 724 aaKnown RBP11.51□□□□□ -0.57
PCAT29-201ENST00000558411 CYP26B1Q9NR63 512 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 TBC1D22BQ9NU19 505 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 TMEM9Q9P0T7 183 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 SLC9A2Q9UBY0 812 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 ERGIC3Q9Y282 383 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 PCDHB12Q9Y5F1 795 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 SLC15A5A6NIM6 579 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 H3BMQ9 156 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 SNAP91O60641 907 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 YBX3P16989 372 aaKnown RBP eCLIP11.51□□□□□ -0.57
PCAT29-201ENST00000558411 SNAP25P60880 206 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 CTBSQ01459 385 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 CEACAM7Q14002 265 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 VWA5B1Q5TIE3 1220 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 IRAK1BP1Q5VVH5 260 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 TATDN1Q6P1N9 297 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 MIER3Q7Z3K6 550 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 NANOGNBQ7Z5D8 188 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 RFX6Q8HWS3 928 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 CPSF7Q8N684 471 aaKnown RBP11.51□□□□□ -0.57
PCAT29-201ENST00000558411 MCUQ8NE86 351 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 SLC7A3Q8WY07 619 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 DUS3LQ96G46 650 aaKnown RBP11.51□□□□□ -0.57
PCAT29-201ENST00000558411 CNDP2Q96KP4 475 aaKnown RBP11.51□□□□□ -0.57
PCAT29-201ENST00000558411 COG8Q96MW5 612 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 KLHL32Q96NJ5 620 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 UHRF1Q96T88 793 aaPredicted RBP11.51□□□□□ -0.57
PCAT29-201ENST00000558411 DCUN1D5Q9BTE7 237 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 COG4Q9H9E3 785 aa11.51□□□□□ -0.57
PCAT29-201ENST00000558411 IQCA1LA6NCM1 817 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 GIPC1O14908 333 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 TADA2AO75478 443 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 ATE1O95260 518 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 STAMBPO95630 424 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 ARP10275 920 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 PTPN1P18031 435 aaKnown RBP11.5□□□□□ -0.57
PCAT29-201ENST00000558411 KCNA4P22459 653 aa11.5□□□□□ -0.57
PCAT29-201ENST00000558411 NOMO1Q15155 1222 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms