RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 APOL1O14791 398 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 ALOX15BO15296 676 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 BEST1O76090 585 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 OAZ2O95190 189 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 POMCP01189 267 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 RBP3P10745 1247 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 SELPP16109 830 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 ACAT1P24752 427 aaKnown RBP8.61□□□□□ -1.03
ATXN3-235ENST00000556082 TKTL1P51854 596 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 ZNF135P52742 658 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-235ENST00000556082 ADIGQ0VDE8 80 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 GPS1Q13098 491 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 BFSP2Q13515 415 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 MBTPS1Q14703 1052 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 TRIP13Q15645 432 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-235ENST00000556082 KRT71Q3SY84 523 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 RNASEH2BQ5TBB1 312 aaKnown RBP8.61□□□□□ -1.03
ATXN3-235ENST00000556082 SCYL2Q6P3W7 929 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 DEFB106AQ8N104 65 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 SIX6OS1Q8N1H7 587 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 OR2W6PQ8NHA6 318 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 CLEC4CQ8WTT0 213 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 RSAD2Q8WXG1 361 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 NTAN1Q96AB6 310 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 SMARCD1Q96GM5 515 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 TTC25Q96NG3 672 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 SERPINB12Q96P63 405 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 UCN2Q96RP3 112 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 FAM118BQ9BPY3 351 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 PAAF1Q9BRP4 392 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 TMEM121Q9BTD3 319 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 MED10Q9BTT4 135 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 SNRNP25Q9BV90 132 aaKnown RBP8.61□□□□□ -1.03
ATXN3-235ENST00000556082 TRIM62Q9BVG3 475 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 FRMD8Q9BZ67 464 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-235ENST00000556082 CDC42EP4Q9H3Q1 356 aaKnown RBP8.61□□□□□ -1.03
ATXN3-235ENST00000556082 PPCSQ9HAB8 311 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 USP29Q9HBJ7 922 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 POPDC2Q9HBU9 364 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 KRT82Q9NSB4 513 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 TMEM161AQ9NX61 479 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 MTMR10Q9NXD2 777 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 FZD10Q9ULW2 581 aa8.61□□□□□ -1.03
ATXN3-235ENST00000556082 KBTBD13C9JR72 458 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 ZBED1O96006 694 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 F9P00740 461 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 AGTP01019 485 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 FYNP06241 537 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 PECAM1P16284 738 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-235ENST00000556082 TSHRP16473 764 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 CAPN2P17655 700 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 NR1D1P20393 614 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 RPL22P35268 128 aaKnown RBP8.6□□□□□ -1.03
ATXN3-235ENST00000556082 ACTN2P35609 894 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 CHKAP35790 457 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 MAGEA4P43358 317 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 MAGEA6P43360 314 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 HCAR3P49019 387 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 LMAN1P49257 510 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 IRAK1P51617 712 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 BCAR1P56945 870 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 MAP3K7CLP57077 242 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 DAOAP59103 153 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 ROR1Q01973 937 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 SCAPQ12770 1279 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 STAT4Q14765 748 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 RASA2Q15283 850 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 CDO1Q16878 200 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 RAB6CQ53S08 254 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 ZC3H12AQ5D1E8 599 aaKnown RBP8.6□□□□□ -1.03
ATXN3-235ENST00000556082 NOMO2Q5JPE7 1267 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 KCTD16Q68DU8 428 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 BZW1Q7L1Q6 419 aaKnown RBP8.6□□□□□ -1.03
ATXN3-235ENST00000556082 LRRC8DQ7L1W4 858 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 FAM126BQ8IXS8 530 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 PPIL6Q8IXY8 311 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 COLGALT2Q8IYK4 626 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 NAT8LQ8N9F0 302 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 GLIS1Q8NBF1 620 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 RNF169Q8NCN4 708 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 ZMIZ2Q8NF64 920 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 URGCPQ8TCY9 931 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-235ENST00000556082 ZNF296Q8WUU4 475 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-235ENST00000556082 PRCCQ92733 491 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-235ENST00000556082 HAUS1Q96CS2 278 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 RBM15Q96T37 977 aaKnown RBP eCLIP8.6□□□□□ -1.03
ATXN3-235ENST00000556082 CCDC77Q9BR77 488 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 CAPS2Q9BXY5 557 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.6□□□□□ -1.031e-11■■■■□ 25.2
ATXN3-235ENST00000556082 RAB6CQ9H0N0 254 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 TSPAN10Q9H1Z9 355 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-235ENST00000556082 NRDE2Q9H7Z3 1164 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 CNOT10Q9H9A5 744 aaKnown RBP8.6□□□□□ -1.03
ATXN3-235ENST00000556082 NINJ2Q9NZG7 142 aa8.6□□□□□ -1.03
ATXN3-235ENST00000556082 SAE1Q9UBE0 346 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-235ENST00000556082 SF3B1O75533 1304 aaKnown RBP eCLIP8.59□□□□□ -1.034e-12■■■■■ 275.7
ATXN3-235ENST00000556082 HACD1B0YJ81 288 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 E7ESA3 106 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 ENPP3O14638 875 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms