RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 PRC1O43663 620 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 KDM1AO60341 852 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 KLHL18O94889 574 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 IL18BPO95998 194 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 POMCP01189 267 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 CELA3BP08861 270 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 ENO2P09104 434 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-228ENST00000554592 MYBL2P10244 700 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 TDGF1P13385 188 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 SFNP31947 248 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 MC4RP32245 332 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 MCM5P33992 734 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 LIMK1P53667 647 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 PTH1RQ03431 593 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 EFEMP1Q12805 493 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 DRP2Q13474 957 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 SIM2Q14190 667 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-228ENST00000554592 LPAL2Q16609 132 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 XKR3Q5GH77 459 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 UBXN11Q5T124 520 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 JAKMIP3Q5VZ66 844 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 VASNQ6EMK4 673 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 SYNE3Q6ZMZ3 975 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 TPRG1Q6ZUI0 275 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 TMTC3Q6ZXV5 915 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 CHD1LQ86WJ1 897 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 RHPN2Q8IUC4 686 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 SMC5Q8IY18 1101 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 COLGALT2Q8IYK4 626 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 ZNF713Q8N859 430 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-228ENST00000554592 HIPK4Q8NE63 616 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 RUFY2Q8WXA3 655 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 CRYGNQ8WXF5 182 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 FGF13Q92913 245 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 MBOAT7Q96N66 472 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 JPH2Q9BR39 696 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-228ENST00000554592 BDH2Q9BUT1 245 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 RWDD1Q9H446 243 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-228ENST00000554592 KCND1Q9NSA2 647 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 MARCH5Q9NX47 278 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 SUCLA2Q9P2R7 463 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-228ENST00000554592 INVSQ9Y283 1065 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 PRG3Q9Y2Y8 225 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-228ENST00000554592 SPEF1Q9Y4P9 236 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 ASB1Q9Y576 335 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 PLXNA4Q9HCM2 1894 aa5.38□□□□□ -1.55
ATXN3-228ENST00000554592 GOLGA8AA7E2F4 631 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 ZNF839A8K0R7 811 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 GOLGA8BA8MQT2 603 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 MAFO75444 373 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-228ENST00000554592 TADA2AO75478 443 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 ECI2O75521 394 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 MPIG6BO95866 241 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 MT-CO1P00395 513 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 KNG1P01042 644 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 ITGB3P05106 788 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 POU2F2P09086 479 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 RXRAP19793 462 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 HOXA9P31269 272 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 HOXA11P31270 313 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-228ENST00000554592 CIITAP33076 1130 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 GPR3P46089 330 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 CXCL12P48061 93 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 CCR3P51677 355 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 JAK3P52333 1124 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 PRKCEQ02156 737 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 NUCB1Q02818 461 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 DSC1Q08554 894 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 NCBP1Q09161 790 aaKnown RBP5.37□□□□□ -1.55
ATXN3-228ENST00000554592 NFE2Q16621 373 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-228ENST00000554592 SKIDA1Q1XH10 827 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 PRR16Q569H4 304 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 PPM1LQ5SGD2 360 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 LIN9Q5TKA1 542 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 RTL10Q7L3V2 364 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 SRGAP1Q7Z6B7 1085 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 FMNL3Q8IVF7 1028 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 EXOC8Q8IYI6 725 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 C1orf162Q8NEQ5 155 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-228ENST00000554592 NUDT10Q8NFP7 164 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 ITFG1Q8TB96 612 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 DNASE1L2Q92874 299 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 MAP4K1Q92918 833 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 NUDT11Q96G61 164 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 FUBP3Q96I24 572 aaKnown RBP eCLIP5.37□□□□□ -1.55
ATXN3-228ENST00000554592 LCORQ96JN0 433 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-228ENST00000554592 GAD1Q99259 594 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 RIT2Q99578 217 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 KXD1Q9BQD3 176 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 IL25Q9H293 177 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 LMAN1LQ9HAT1 526 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 IFT122Q9HBG6 1241 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 SLC39A2Q9NP94 309 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 AASDHPPTQ9NRN7 309 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 AGPAT5Q9NUQ2 364 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 RBM28Q9NW13 759 aaKnown RBP5.37□□□□□ -1.55
ATXN3-228ENST00000554592 UCKL1Q9NWZ5 548 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 BARHL2Q9NY43 387 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 GDE1Q9NZC3 331 aa5.37□□□□□ -1.55
ATXN3-228ENST00000554592 CNOT11Q9UKZ1 510 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms