RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 SMIM28A0A1B0GU29 152 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 ERVH48-1M5A8F1 160 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 PDE2AO00408 941 aaPredicted RBP12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 PODXLO00592 558 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 DPYSL4O14531 572 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 TRDMT1O14717 391 aaKnown RBP12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 ZNF185O15231 689 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 THAP12O43422 761 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 FTCDO95954 541 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 CALB1P05937 261 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 THP07101 528 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 CHRNB2P17787 502 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 FGFR3P22607 806 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 POLR2BP30876 1174 aaKnown RBP12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 ZNF132P52740 706 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 SNX16P57768 344 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 ROR1Q01973 937 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 SOX4Q06945 474 aaPredicted RBP12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 TUSC3Q13454 348 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 CAMK2BQ13554 666 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 DHX34Q14147 1143 aaKnown RBP12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 STILQ15468 1287 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 SPDYCQ5MJ68 293 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 ALS2CLQ60I27 953 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 LEMD2Q8NC56 503 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 CAVIN3Q969G5 261 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 ZNF512Q96ME7 567 aaPredicted RBP12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 PPP1R10Q96QC0 940 aaKnown RBP12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 SEMA4CQ9C0C4 833 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 RAB17Q9H0T7 212 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 LHX5Q9H2C1 402 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 ITGA11Q9UKX5 1188 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 PCDHGC3Q9UN70 934 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 PCDHA3Q9Y5H8 950 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 BACE2Q9Y5Z0 518 aa12.54□□□□□ -0.4
RBFOX1-214ENST00000552089 MUC22E2RYF6 1773 aaPredicted RBP12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 MYO1FO00160 1098 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 CEP104O60308 925 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 SEC24AO95486 1093 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 VNN1O95497 513 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 FAM163BP0C2L3 166 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 ACO1P21399 889 aaKnown RBP12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 ITPKAP23677 461 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 CDH5P33151 784 aaPredicted RBP12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 EIF2S3P41091 472 aaKnown RBP12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 EPHA5P54756 1037 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 VSNL1P62760 191 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 SLC14A1Q13336 389 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 DUOXA1Q1HG43 343 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 XKR4Q5GH76 650 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 PEAR1Q5VY43 1037 aaPredicted RBP12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 ARID3BQ8IVW6 561 aaPredicted RBP12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 PDCD7Q8N8D1 485 aaKnown RBP12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 TMEM35BQ8NCS4 154 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 ZNF461Q8TAF7 563 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 TATDN2Q93075 761 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 C18orf25Q96B23 403 aaPredicted RBP12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 FAM212AQ96EL1 285 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 CHFRQ96EP1 664 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 PNKPQ96T60 521 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 NCAPGQ9BPX3 1015 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 UBXN6Q9BZV1 441 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 TSPYL1Q9H0U9 437 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 CAPN10Q9HC96 672 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 GDF3Q9NR23 364 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 TOPORSQ9NS56 1045 aaPredicted RBP12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 PARVAQ9NVD7 372 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 CNTN3Q9P232 1028 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 WDR35Q9P2L0 1181 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 NXF1Q9UBU9 619 aaKnown RBP12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 PILRBQ9UKJ0 227 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 SRPK3Q9UPE1 567 aa12.53□□□□□ -0.4
RBFOX1-214ENST00000552089 PTPRBP23467 1997 aa12.52□□□□□ -0.4
RBFOX1-214ENST00000552089 FAM149AA5PLN7 773 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 FAM187AA6NFU0 413 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 LACTBL1A8MY62 500 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 KRIT1O00522 736 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 NDC80O14777 642 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 XPOTO43592 962 aaKnown RBP12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 MMEP08473 750 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 SERPINF2P08697 491 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 ABCB4P21439 1286 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 DRD1P21728 446 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 GNA15P30679 374 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 CHRNA3P32297 505 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 CTNNA1P35221 906 aaKnown RBP12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 HOXD12P35452 270 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 AARSP49588 968 aaKnown RBP eCLIP12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 WNT7BP56706 349 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 RWDD2BP57060 319 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 CASP8Q14790 479 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 STXBP5Q5T5C0 1151 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 LRRC38Q5VT99 294 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 SYDE1Q6ZW31 735 aaPredicted RBP12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 GLRX5Q86SX6 157 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 RASSF3Q86WH2 238 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 TCEAL8Q8IYN2 117 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 MCOLN2Q8IZK6 566 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 MREGQ8N565 214 aa12.52□□□□□ -0.41
RBFOX1-214ENST00000552089 C1orf131Q8NDD1 294 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms