RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 PCDHA5Q9Y5H7 936 aa10.7□□□□□ -0.7
BEST3-210ENST00000551160 CKAP5Q14008 2032 aa10.7□□□□□ -0.7
BEST3-210ENST00000551160 A0A1W2PP55 124 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 TGFB1I1O43294 461 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 SDC3O75056 442 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 PHACTR2O75167 634 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 ACP1P24666 158 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 CD38P28907 300 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 BIRC3Q13489 604 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 PROX2Q3B8N5 592 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 ZNF667Q5HYK9 610 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 COLEC12Q5KU26 742 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 TADA2BQ86TJ2 420 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 ADIPOR2Q86V24 386 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 FAM217AQ8IXS0 508 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 CPXM2Q8N436 756 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 PLEKHO2Q8TD55 490 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 SNRNP27Q8WVK2 155 aaKnown RBP10.69□□□□□ -0.7
BEST3-210ENST00000551160 SKA1Q96BD8 255 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 SLC2A11Q9BYW1 496 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 VRTNQ9H8Y1 702 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 FBRSQ9HAH7 460 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 KIAA1586Q9HCI6 787 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 ABCB8Q9NUT2 735 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 FBXL12Q9NXK8 326 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 CCDC39Q9UFE4 941 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 IL17BQ9UHF5 180 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 PLA2G4CQ9UP65 541 aa10.69□□□□□ -0.7
BEST3-210ENST00000551160 A0A087X0B3 334 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 SLC12A8A0AV02 714 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 TLR4O00206 839 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 TRIM38O00635 465 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 CLIC2O15247 247 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 MID1O15344 667 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 SIGLEC6O43699 453 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 RALAP11233 206 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 RXRGP48443 463 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 KIF11P52732 1056 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 COG7P83436 770 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 EHHADHQ08426 723 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 NFATC3Q12968 1075 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 NCOA4Q13772 614 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 BMT2Q1RMZ1 405 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 USP30Q70CQ3 517 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 CCDC186Q7Z3E2 898 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 SPATS2Q86XZ4 545 aaKnown RBP10.68□□□□□ -0.7
BEST3-210ENST00000551160 CRYBG2Q8N1P7 616 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 WFIKKN2Q8TEU8 576 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 GOLGA1Q92805 767 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 VCPIP1Q96JH7 1222 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 SERAC1Q96JX3 654 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 CLIC6Q96NY7 704 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 TWNKQ96RR1 684 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 DCLK3Q9C098 648 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 RSPH9Q9H1X1 276 aaPredicted RBP10.68□□□□□ -0.7
BEST3-210ENST00000551160 NEUROG2Q9H2A3 272 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 MARCH2Q9P0N8 246 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 GGA2Q9UJY4 613 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 KIF3AQ9Y496 699 aa10.68□□□□□ -0.7
BEST3-210ENST00000551160 NOTCH2Q04721 2471 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 C10orf142B7Z368 130 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 USP12O75317 370 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 DXOO77932 396 aaKnown RBP10.67□□□□□ -0.7
BEST3-210ENST00000551160 VNN1O95497 513 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 DLDP09622 509 aaKnown RBP10.67□□□□□ -0.7
BEST3-210ENST00000551160 PABPC1P11940 636 aaKnown RBP10.67□□□□□ -0.7
BEST3-210ENST00000551160 GJB2P29033 226 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 STAT6P42226 847 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 SGSHP51688 502 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 PPP2CBP62714 309 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 PPP2CAP67775 309 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 C6orf132Q5T0Z8 1188 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 CDCP2Q5VXM1 449 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 MBLAC2Q68D91 279 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 NELFCDQ8IXH7 590 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 CCDC65Q8IXS2 484 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.67□□□□□ -0.7
BEST3-210ENST00000551160 XXYLT1Q8NBI6 393 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 OR2T34Q8NGX1 318 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 WFDC5Q8TCV5 224 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 CDK5RAP1Q96SZ6 601 aaKnown RBP10.67□□□□□ -0.7
BEST3-210ENST00000551160 PANK2Q9BZ23 570 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 PNPLA8Q9NP80 782 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 ASCL3Q9NQ33 180 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 CLIC5Q9NZA1 410 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 FBXO2Q9UK22 296 aaPredicted RBP10.67□□□□□ -0.7
BEST3-210ENST00000551160 NCKAP1Q9Y2A7 1128 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 CLIC4Q9Y696 253 aa10.67□□□□□ -0.7
BEST3-210ENST00000551160 USP9XQ93008 2570 aaPredicted RBP10.66□□□□□ -0.7
BEST3-210ENST00000551160 LRRC72A6NJI9 287 aa10.66□□□□□ -0.7
BEST3-210ENST00000551160 K7ENP7 123 aa10.66□□□□□ -0.7
BEST3-210ENST00000551160 SIN3BO75182 1162 aa10.66□□□□□ -0.7
BEST3-210ENST00000551160 CSO75390 466 aaKnown RBP10.66□□□□□ -0.7
BEST3-210ENST00000551160 RNASEH2AO75792 299 aaKnown RBP10.66□□□□□ -0.7
BEST3-210ENST00000551160 KIF20AO95235 890 aa10.66□□□□□ -0.7
BEST3-210ENST00000551160 CD70P32970 193 aa10.66□□□□□ -0.7
BEST3-210ENST00000551160 ASPAP45381 313 aa10.66□□□□□ -0.7
BEST3-210ENST00000551160 LSSP48449 732 aa10.66□□□□□ -0.7
BEST3-210ENST00000551160 PSEN1P49768 467 aa10.66□□□□□ -0.7
BEST3-210ENST00000551160 ERVPABLB-1P60509 514 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms