RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 CUL4AQ13619 759 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 ARHGEF7Q14155 803 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 RPS6KA2Q15349 733 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 INSCQ1MX18 579 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 RINLQ6ZS11 566 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 RRAGAQ7L523 313 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 CHD1LQ86WJ1 897 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 RASAL3Q86YV0 1011 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 RASGRP3Q8IV61 690 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 TTC30BQ8N4P2 665 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 B3GALNT2Q8NCR0 500 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 SCAMP5Q8TAC9 235 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 GRAMD1AQ96CP6 724 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 BRD8Q9H0E9 1235 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 PDCL3Q9H2J4 239 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 ELAC1Q9H777 363 aaKnown RBP4.71□□□□□ -1.66
SCAF11-210ENST00000547654 LPAR3Q9UBY5 353 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.71□□□□□ -1.66
SCAF11-210ENST00000547654 MAGED1Q9Y5V3 778 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-210ENST00000547654 CHD1O14646 1710 aa4.71□□□□□ -1.66
SCAF11-210ENST00000547654 FER1L4A9Z1Z3 1794 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 NCAPD3P42695 1498 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 MRC2Q9UBG0 1479 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 AQP7P3A6NL99 342 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 TOR1BO14657 336 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 TP73O15350 636 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 P4HA2O15460 535 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 CCP110O43303 1012 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 KCNAB3O43448 404 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 DNPH1O43598 174 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 TSPAN3O60637 253 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 KRT38O76015 456 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 URI1O94763 535 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-210ENST00000547654 SCGB1D1O95968 90 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 SRGAP2BP0DMP2 458 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 AKR1B1P15121 316 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 BTF3P20290 206 aaKnown RBP4.7□□□□□ -1.66
SCAF11-210ENST00000547654 KELP23276 732 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 ATICP31939 592 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 MCM2P49736 904 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 CCT4P50991 539 aaKnown RBP4.7□□□□□ -1.66
SCAF11-210ENST00000547654 ZNF134P52741 427 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 ZBED6P86452 979 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 CALD1Q05682 793 aaKnown RBP4.7□□□□□ -1.66
SCAF11-210ENST00000547654 PIGFQ07326 219 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.7□□□□□ -1.66
SCAF11-210ENST00000547654 GPR68Q15743 365 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 ETFDHQ16134 617 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 GPR162Q16538 588 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 TMEM119Q4V9L6 283 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 RILPL1Q5EBL4 403 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 RAP1GAP2Q684P5 730 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 NFRKBQ6P4R8 1299 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 KIAA0408Q6ZU52 694 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 BBS12Q6ZW61 710 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-210ENST00000547654 USP37Q86T82 979 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 TTC30AQ86WT1 665 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 ARMC8Q8IUR7 673 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 CSGALNACT1Q8TDX6 532 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 CPT1BQ92523 772 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 SNX19Q92543 992 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 RSC1A1Q92681 617 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 RPL36ALQ969Q0 106 aaKnown RBP4.7□□□□□ -1.66
SCAF11-210ENST00000547654 ATP6V1E2Q96A05 226 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 MOGAT1Q96PD6 335 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 NELL2Q99435 816 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 EPS8L2Q9H6S3 715 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 ACAD9Q9H845 621 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 ZBTB26Q9HCK0 441 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 KLC4Q9NSK0 619 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 TMOD4Q9NZQ9 345 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 NFKBIL1Q9UBC1 381 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-210ENST00000547654 XPR1Q9UBH6 696 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 DKK3Q9UBP4 350 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 CFDP1Q9UEE9 299 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-210ENST00000547654 TBC1D29Q9UFV1 150 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 C19orf53Q9UNZ5 99 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-210ENST00000547654 TBC1D30Q9Y2I9 924 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 HMGXB3Q12766 1538 aa4.7□□□□□ -1.66
SCAF11-210ENST00000547654 H7C4K7 107 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 POLRMTO00411 1230 aaKnown RBP4.69□□□□□ -1.66
SCAF11-210ENST00000547654 AP3D1O14617 1153 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 PCDH17O14917 1159 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 DOK2O60496 412 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 CCNT2O60583 730 aaKnown RBP4.69□□□□□ -1.66
SCAF11-210ENST00000547654 TTLL1O95922 423 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 VIPP01282 170 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 RHOP08100 348 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 PIM1P11309 404 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-210ENST00000547654 MST1P26927 711 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 CALRP27797 417 aaKnown RBP4.69□□□□□ -1.66
SCAF11-210ENST00000547654 PTDSS1P48651 473 aaKnown RBP4.69□□□□□ -1.66
SCAF11-210ENST00000547654 WNT3P56703 355 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 TFF2Q03403 129 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 ITIH3Q06033 890 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 KLF9Q13886 244 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-210ENST00000547654 PLCB4Q15147 1175 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 TAF11Q15544 211 aa4.69□□□□□ -1.66
SCAF11-210ENST00000547654 BTBD16Q32M84 506 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms