RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 CFAP69A5D8W1 941 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 KCNJ18B7U540 433 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 CBX4O00257 560 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 KCNK3O14649 394 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 SLC9A3R1O14745 358 aaPredicted RBP5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 CPLX1O14810 134 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 SLC16A4O15374 487 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 CLDN3O15551 220 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 XPOTO43592 962 aaKnown RBP5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 PCDHGA12O60330 932 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 NEMFO60524 1076 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 HIP1RO75146 1068 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 PHACTR2O75167 634 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 TULP3O75386 442 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 OLFM2O95897 454 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 NCAM1P13591 858 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 PFKLP17858 780 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 ACTN2P35609 894 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 CSNK1EP49674 416 aaKnown RBP5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 TMPRSS3P57727 454 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 RPL10AP62906 217 aaKnown RBP5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 SLC7A9P82251 487 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 PPP2R3AQ06190 1150 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 MAPK7Q13164 816 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 TOB2Q14106 344 aaPredicted RBP5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 C10orf76Q5T2E6 689 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 HES3Q5TGS1 186 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 NXNQ6DKJ4 435 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 JADE1Q6IE81 842 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 FBXL19Q6PCT2 694 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 BLOC1S2Q6QNY1 142 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 NXPE4Q6UWF7 544 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 ZPBP2Q6X784 338 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 C1orf229Q6ZS94 237 aaPredicted RBP5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 ZBTB46Q86UZ6 589 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 CD163Q86VB7 1156 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 METTL23Q86XA0 190 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 NAT16Q8N8M0 369 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 FSIP1Q8NA03 581 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 TERB1Q8NA31 727 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 MYRIPQ8NFW9 859 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 EPS8L3Q8TE67 593 aaKnown RBP5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 LEO1Q8WVC0 666 aaPredicted RBP5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 IFT43Q96FT9 208 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 HIC2Q96JB3 615 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 TSPAN18Q96SJ8 248 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 PKMYT1Q99640 499 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 PYM1Q9BRP8 204 aaKnown RBP5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 GPR174Q9BXC1 333 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 TRIM4Q9C037 500 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 GRIP2Q9C0E4 1043 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 CCSER1Q9C0I3 900 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 ABCB6Q9NP58 842 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 NPHS2Q9NP85 383 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 KMT5AQ9NQR1 393 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 ITM2CQ9NQX7 267 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 ST7Q9NRC1 585 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 SMPD4Q9NXE4 827 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 NOP53Q9NZM5 478 aaKnown RBP5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 USP36Q9P275 1121 aaKnown RBP5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 ANKMY1Q9P2S6 941 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 FTSJ1Q9UET6 329 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 EIF2B4Q9UI10 523 aaKnown RBP5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 SNX11Q9Y5W9 270 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 RAD54BQ9Y620 910 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 CPQQ9Y646 472 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 MYLKQ15746 1914 aa5.15□□□□□ -1.59
NPIPB4-219ENST00000543660 CENPEQ02224 2701 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 NUMA1Q14980 2115 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 ZNF840PA6NDX5 716 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 A6NJY4 79 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 WASH3PC4AMC7 463 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 PRRT4C9JH25 899 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 H0Y8X5 98 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 HOXC11O43248 304 aaPredicted RBP5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 PAPSS1O43252 624 aaPredicted RBP5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 DTNBO60941 627 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 RFPL3O75679 317 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 C1SP09871 688 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 MAPTP10636 758 aaKnown RBP5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 CDK4P11802 303 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 GP1BBP13224 206 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 MUTP22033 750 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 ITGB7P26010 798 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 PPM1FP49593 454 aaPredicted RBP5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 TAF6P49848 677 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 CCT8P50990 548 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 PDE6CP51160 858 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 TPMTP51580 245 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 AFF3P51826 1226 aaKnown RBP5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 UCNP55089 124 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 GAD2Q05329 585 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 ITKQ08881 620 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 DNAJC3Q13217 504 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 CLN3Q13286 438 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 PDIA5Q14554 519 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 LBRQ14739 615 aaKnown RBP5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 CCDC142Q17RM4 750 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 CFAP221Q4G0U5 840 aa5.14□□□□□ -1.59
NPIPB4-219ENST00000543660 INO80DQ53TQ3 878 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms