RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 TGS1Q96RS0 853 aaKnown RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 FMO2Q99518 471 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 TRAF4Q9BUZ4 470 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 TARS2Q9BW92 718 aaKnown RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 CADM1Q9BY67 442 aaKnown RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 OSBPL8Q9BZF1 889 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 POLR1EQ9GZS1 481 aaKnown RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 NYXQ9GZU5 481 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 ZMYND12Q9H0C1 365 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 CSRNP2Q9H175 543 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 C1orf21Q9H246 121 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 LY9Q9HBG7 655 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 ANKHQ9HCJ1 492 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 TIGARQ9NQ88 270 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 SLC35C2Q9NQQ7 365 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 CYP26B1Q9NR63 512 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 HOMER2Q9NSB8 354 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 RBM12Q9NTZ6 932 aaKnown RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 KBTBD4Q9NVX7 518 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 GGA3Q9NZ52 723 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 TMOD2Q9NZR1 351 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 CNTN3Q9P232 1028 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 PI4KBQ9UBF8 816 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 TRMT6Q9UJA5 497 aaKnown RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 TMEM59LQ9UK28 342 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 POU2F3Q9UKI9 436 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 BAG5Q9UL15 447 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 GTF2A1LQ9UNN4 478 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 SORCS3Q9UPU3 1222 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 GINS2Q9Y248 185 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 HPSEQ9Y251 543 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 DTX4Q9Y2E6 619 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 SIK3Q9Y2K2 1263 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 MTO1Q9Y2Z2 717 aaKnown RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 PRELID3BQ9Y3B1 194 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 MAU2Q9Y6X3 613 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 PMF1-BGLAPU3KQ54 211 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 INO80Q9ULG1 1556 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 ABCC6O95255 1503 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 LRRC7Q96NW7 1537 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 KIAA0586Q9BVV6 1533 aa5.33□□□□□ -1.56
SNHG1-218ENST00000541615 GPATCH8Q9UKJ3 1502 aaKnown RBP5.33□□□□□ -1.56
SNHG1-218ENST00000541615 CEP152O94986 1710 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 SF3B1O75533 1304 aaKnown RBP eCLIP5.32□□□□□ -1.562e-7■■■■■ 35.3
SNHG1-218ENST00000541615 CUL7Q14999 1698 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 SAGE2PA6NJ88 616 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 B4E1Z4 1266 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 H3BSA7 217 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 L7N2F9 121 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 CACNB4O00305 520 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-218ENST00000541615 RTCAO00442 366 aaKnown RBP5.32□□□□□ -1.56
SNHG1-218ENST00000541615 PER2O15055 1255 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 KIAA0355O15063 1070 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 CHMP2AO43633 222 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 BUD23O43709 281 aaKnown RBP5.32□□□□□ -1.56
SNHG1-218ENST00000541615 GMDSO60547 372 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 GAS7O60861 476 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 ATG13O75143 517 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 TM7SF2O76062 418 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 CFBP00751 764 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 ANXA6P08133 673 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 PFKFB1P16118 471 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 PTPN1P18031 435 aaKnown RBP5.32□□□□□ -1.56
SNHG1-218ENST00000541615 ITGALP20701 1170 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 DNAJB1P25685 340 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 PCSK6P29122 969 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 GNALP38405 381 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 GARSP41250 739 aaKnown RBP5.32□□□□□ -1.56
SNHG1-218ENST00000541615 STT3AP46977 705 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 SULT1E1P49888 294 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 CCT4P50991 539 aaKnown RBP5.32□□□□□ -1.56
SNHG1-218ENST00000541615 HIRAP54198 1017 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-218ENST00000541615 MYL6P60660 151 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 RNF4P78317 190 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 UBE3AQ05086 875 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 NFX1Q12986 1120 aaKnown RBP5.32□□□□□ -1.56
SNHG1-218ENST00000541615 IFIT5Q13325 482 aaKnown RBP5.32□□□□□ -1.56
SNHG1-218ENST00000541615 IKZF1Q13422 519 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 CAPRIN1Q14444 709 aaKnown RBP5.32□□□□□ -1.56
SNHG1-218ENST00000541615 SLC39A14Q15043 492 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 NECTIN1Q15223 517 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 PTPAQ15257 358 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 TTF1Q15361 905 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-218ENST00000541615 TYSND1Q2T9J0 566 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 GRAMD1BQ3KR37 738 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 CYP27C1Q4G0S4 372 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 TCTE1Q5JU00 501 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 ODR4Q5SWX8 454 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 MPP7Q5T2T1 576 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 ELP2Q6IA86 826 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 SULT1C3Q6IMI6 304 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 ZNF544Q6NX49 715 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 C3orf33Q6P1S2 294 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 ZFP1Q6P2D0 407 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 ERICH5Q6P6B1 374 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 CCDC149Q6ZUS6 474 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 FAM47EQ6ZV65 393 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 PLEKHM3Q6ZWE6 761 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 FKBP9P1Q75LS8 142 aa5.32□□□□□ -1.56
SNHG1-218ENST00000541615 UTS2BQ765I0 119 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms