RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 KAT6AQ92794 2004 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 TCAF2A6NFQ2 919 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 O00370 1275 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 MGST3O14880 152 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 PPM1DO15297 605 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 NKX2-8O15522 239 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 HCRTR2O43614 444 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 TIMM44O43615 452 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 BUD23O43709 281 aaKnown RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 PPP6R2O75170 966 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 KAT7O95251 611 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 FYNP06241 537 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 HOXC9P31274 260 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 UBA7P41226 1012 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 RAP1GAPP47736 663 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 CLCN2P51788 898 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 VAV2P52735 878 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 ATXN1P54253 815 aaKnown RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 ADORA2A-AS1P86434 159 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 SLC25A3Q00325 362 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF844Q08AG5 666 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 MYO1EQ12965 1108 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 EIF2B5Q13144 721 aaKnown RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 OLIG2Q13516 323 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 ACVR2BQ13705 512 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 PDCD4Q53EL6 469 aaKnown RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 AWAT1Q58HT5 328 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 TCP11X2Q5H9J9 407 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 FKBP15Q5T1M5 1219 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 TCERG1LQ5VWI1 586 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 EFCAB12Q6NXP0 572 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 ATG14Q6ZNE5 492 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 MAATS1Q7Z4T9 603 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 GRASPQ7Z6J2 395 aaPredicted RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 C1QL4Q86Z23 238 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 FUKQ8N0W3 1084 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 TMEM132CQ8N3T6 1108 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF276Q8N554 614 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 PPFIBP2Q8ND30 876 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 SUN3Q8TAQ9 357 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 ST8SIA2Q92186 375 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF566Q969W8 418 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 KAZALD1Q96I82 304 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 SCLT1Q96NL6 688 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 KCNC2Q96PR1 638 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 BARD1Q99728 777 aaKnown RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 MS4A7Q9GZW8 240 aaPredicted RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 TMX4Q9H1E5 349 aaPredicted RBP1.18□□□□□ -2.22
HIF1A-204ENST00000539097 SFXN1Q9H9B4 322 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 CD248Q9HCU0 757 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 SERTAD3Q9UJW9 196 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 DTX4Q9Y2E6 619 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 DERAQ9Y315 318 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 TMEM232C9JQI7 657 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SNAP23O00161 211 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 EBAG9O00559 213 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PRPF4O43172 522 aaKnown RBP eCLIP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 CDC14BO60729 498 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 RNASEH2AO75792 299 aaKnown RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 RASSF9O75901 435 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 MMP3P08254 477 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SRGAP2BP0DMP2 458 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 IRF1P10914 325 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 TAL1P17542 331 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 KCNA3P22001 575 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 GPTP24298 496 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 ABCD3P28288 659 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 EEF1DP29692 281 aaKnown RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 ADPRHP54922 357 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 LINC00310P59036 64 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 DYRK1AQ13627 763 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 THOC5Q13769 683 aaKnown RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 MYBPC2Q14324 1141 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 NR1D2Q14995 579 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PREPLQ4J6C6 727 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF484Q5JVG2 852 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 WDR45BQ5MNZ6 344 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 JAKMIP3Q5VZ66 844 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 FAM90A2PQ658T7 463 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 TMEM132EQ6IEE7 984 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 NAPEPLDQ6IQ20 393 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 OGFOD2Q6N063 350 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 FAM122CQ6P4D5 195 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 SLC22A25Q6T423 547 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 TMEM108Q6UXF1 575 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 DENND5BQ6ZUT9 1274 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 H1FNTQ75WM6 255 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 RNF44Q7L0R7 432 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 TSPAN33Q86UF1 283 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 FAM185AQ8N0U4 392 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 PAQR4Q8N4S7 273 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 MAFAQ8NHW3 353 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 C9orf43Q8TAL5 461 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 DNAJB14Q8TBM8 379 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 TBC1D15Q8TC07 691 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 GCDHQ92947 438 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 HAPLN3Q96S86 360 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 CINPQ9BW66 212 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-204ENST00000539097 KRTAP3-1Q9BYR8 98 aa1.17□□□□□ -2.22
HIF1A-204ENST00000539097 CCDC68Q9H2F9 335 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms