RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 RNF4P78317 190 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 FANCCQ00597 558 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 CYP4F3Q08477 520 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 PRPF4BQ13523 1007 aaKnown RBP7.19□□□□□ -1.26
SDCBP-210ENST00000522843 INF2Q27J81 1249 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 BBS9Q3SYG4 887 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 FBXO43Q4G163 708 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 ZNF394Q53GI3 561 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 NCAPH2Q6IBW4 605 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 CENPPQ6IPU0 288 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 ZNF280DQ6N043 979 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 TOGARAM2Q6ZUX3 1019 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 MAEAQ7L5Y9 396 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 C11orf74Q86VG3 221 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 SFTPA1Q8IWL2 248 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 TPH2Q8IWU9 490 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 ATAD1Q8NBU5 361 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 CCDC148Q8NFR7 591 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 USP33Q8TEY7 942 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 FAM20AQ96MK3 541 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 HSD17B14Q9BPX1 270 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 KIFC3Q9BVG8 833 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 PRORYQ9H606 182 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 KIAA1522Q9P206 1035 aaPredicted RBP7.19□□□□□ -1.26
SDCBP-210ENST00000522843 TPCN1Q9ULQ1 816 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 PCDHGB7Q9Y5F8 929 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 TIMM13Q9Y5L4 95 aaPredicted RBP7.19□□□□□ -1.26
SDCBP-210ENST00000522843 COL12A1Q99715 3063 aa7.19□□□□□ -1.26
SDCBP-210ENST00000522843 COL6A6A6NMZ7 2263 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 PIEZO2Q9H5I5 2752 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 OBSL1O75147 1896 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 MTMR11A4FU01 709 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 J3QKU1 62 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 USO1O60763 962 aaKnown RBP7.18□□□□□ -1.26
SDCBP-210ENST00000522843 CLEC3AO75596 197 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 OAZ2O95190 189 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 LARGE1O95461 756 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 CFIP05156 583 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 SERPINF2P08697 491 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 ATF6P18850 670 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 RDXP35241 583 aaKnown RBP7.18□□□□□ -1.26
SDCBP-210ENST00000522843 NLRP5P59047 1200 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 GPR17Q13304 367 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 KIR3DS1Q14943 382 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 RTP5Q14D33 572 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 PTPAQ15257 358 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 CRY1Q16526 586 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 HSF5Q4G112 596 aaPredicted RBP7.18□□□□□ -1.26
SDCBP-210ENST00000522843 LYSMD4Q5XG99 296 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 LPCAT2Q7L5N7 544 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 CMTM8Q8IZV2 173 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 HDDC3Q8N4P3 179 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 CCDC33Q8N5R6 958 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 DEFB119Q8N690 84 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 PIP4K2CQ8TBX8 421 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 PIGOQ8TEQ8 1089 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 CD101Q93033 1021 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 FCRL2Q96LA5 508 aaPredicted RBP7.18□□□□□ -1.26
SDCBP-210ENST00000522843 EIF2AK1Q9BQI3 630 aaKnown RBP7.18□□□□□ -1.26
SDCBP-210ENST00000522843 SLC26A6Q9BXS9 759 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 PRDM14Q9GZV8 571 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 SLKQ9H2G2 1235 aaPredicted RBP7.18□□□□□ -1.26
SDCBP-210ENST00000522843 SH3GLB2Q9NR46 395 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 ANKEF1Q9NU02 776 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 THG1LQ9NWX6 298 aaKnown RBP7.18□□□□□ -1.26
SDCBP-210ENST00000522843 MYRFQ9Y2G1 1151 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 CEP192Q8TEP8 1941 aa7.18□□□□□ -1.26
SDCBP-210ENST00000522843 MUC22E2RYF6 1773 aaPredicted RBP7.18□□□□□ -1.26
SDCBP-210ENST00000522843 TRABD2BA6NFA1 517 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 M0QZQ0 153 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 TNFRSF10CO14798 259 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 ARHGAP6O43182 974 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 PRICKLE3O43900 615 aaPredicted RBP7.17□□□□□ -1.26
SDCBP-210ENST00000522843 KCNE1P15382 129 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 NMT1P30419 496 aaKnown RBP7.17□□□□□ -1.26
SDCBP-210ENST00000522843 OPRD1P41143 372 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 OSTNP61366 133 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 SRSF1Q07955 248 aaKnown RBP eCLIP7.17□□□□□ -1.26
SDCBP-210ENST00000522843 PLD1Q13393 1074 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 HNRNPDQ14103 355 aaKnown RBP7.17□□□□□ -1.26
SDCBP-210ENST00000522843 MAPK6Q16659 721 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 DUOXA1Q1HG43 343 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 DCAF4L1Q3SXM0 396 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 ARHGAP15Q53QZ3 475 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 C2orf27AQ580R0 203 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 EARS2Q5JPH6 523 aaKnown RBP7.17□□□□□ -1.26
SDCBP-210ENST00000522843 ZFYVE27Q5T4F4 411 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 PPP4R3AQ6IN85 833 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 GLRX5Q86SX6 157 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 NAXDQ8IW45 347 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 BLIDQ8IZY5 108 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 AIFM3Q96NN9 605 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 RNF26Q9BY78 433 aaPredicted RBP7.17□□□□□ -1.26
SDCBP-210ENST00000522843 CDT1Q9H211 546 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 ECT2Q9H8V3 914 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 PTPRHQ9HD43 1115 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 TUBGCP4Q9UGJ1 667 aa7.17□□□□□ -1.26
SDCBP-210ENST00000522843 CNOT11Q9UKZ1 510 aaKnown RBP7.17□□□□□ -1.26
SDCBP-210ENST00000522843 NAP1L2Q9ULW6 460 aaPredicted RBP7.17□□□□□ -1.26
SDCBP-210ENST00000522843 MMP17Q9ULZ9 603 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms