RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 GALNT4Q8N4A0 578 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 TMEM57Q8N5G2 664 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 C3orf49Q96BT1 292 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 SARAFQ96BY9 339 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 TRMT61AQ96FX7 289 aaKnown RBP5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 HERC2P3Q9BVR0 1158 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 PHF7Q9BWX1 381 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 SLC22A11Q9NSA0 550 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 SERTAD4Q9NUC0 356 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 TMLHEQ9NVH6 421 aa5.29□□□□□ -1.56
HMGB1P1-201ENST00000522557 SAC3D1A6NKF1 404 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 PMPCBO75439 489 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 BAIAP3O94812 1187 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 ONECUT2O95948 504 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 TMEM225BP0DP42 221 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 MAN1A1P33908 653 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 CASP2P42575 452 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 BMPR2Q13873 1038 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 TBRG1Q3YBR2 411 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 FAM153CQ494X1 144 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 ZNF484Q5JVG2 852 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 FAM180BQ6P0A1 224 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 DPY19L3Q6ZPD9 716 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 SYT13Q7L8C5 426 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 FSTL5Q8N475 847 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 CEP70Q8NHQ1 597 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 GLMPQ8WWB7 406 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 R3HDM4Q96D70 268 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 ARHGEF3Q9NR81 526 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 GAR1Q9NY12 217 aaKnown RBP5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 NKX1-2Q9UD57 310 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 SWAP70Q9UH65 585 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 ASAP1Q9ULH1 1129 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 FRMD4BQ9Y2L6 1034 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 AFG3L2Q9Y4W6 797 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 SCINQ9Y6U3 715 aa5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 FNDC1Q4ZHG4 1894 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P1-201ENST00000522557 AOX1Q06278 1338 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 ITIH6Q6UXX5 1313 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 CCDC187A0A096LP49 1063 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 TBX18O95935 607 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 FESP07332 822 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 CSF1P09603 554 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 EBLN1P0CF75 366 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 ATP1A3P13637 1013 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 ELF1P32519 619 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 CCT8P50990 548 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 CCT4P50991 539 aaKnown RBP5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 RPL15P61313 204 aaKnown RBP5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 TLE3Q04726 772 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 CTXN3Q4LDR2 81 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 PLAC9Q5JTB6 97 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 TREML2Q5T2D2 321 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 GPATCH4Q5T3I0 446 aaKnown RBP5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 SLC9C2Q5TAH2 1124 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 ANO7Q6IWH7 933 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 ACSM6Q6P461 480 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 MAATS1Q7Z4T9 603 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 RAB11FIP4Q86YS3 637 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 PTGR2Q8N8N7 351 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 RP9Q8TA86 221 aaKnown RBP5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 ADAMTS18Q8TE60 1221 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 HMGB4Q8WW32 186 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 RFFLQ8WZ73 363 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 SLC26A6Q9BXS9 759 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 GPR63Q9BZJ6 419 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 JMJD4Q9H9V9 463 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 SAP30LQ9HAJ7 183 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 LIN7CQ9NUP9 197 aaKnown RBP5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 TNFRSF18Q9Y5U5 241 aa5.27□□□□□ -1.57
HMGB1P1-201ENST00000522557 STX16-NPEPL1H3BU86 382 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 GCOM1H8Y6P7 765 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 STX16O14662 325 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 DRD1P21728 446 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 ADRA1DP25100 572 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 MTHFSP49914 203 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 SOX10P56693 466 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 RBM6P78332 1123 aaKnown RBP5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 PSG6Q00889 435 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 MAPK7Q13164 816 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 SLC12A1Q13621 1099 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 DLGAP5Q15398 846 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 ANKRD45Q5TZF3 282 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 ATG16L1Q676U5 607 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 PTCHD4Q6ZW05 846 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 Q6ZWC4 215 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 RSRC2Q7L4I2 434 aaKnown RBP5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 ZNF551Q7Z340 670 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 PNPLA1Q8N8W4 532 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 EXD3Q8N9H8 876 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 LSM14AQ8ND56 463 aaKnown RBP5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 ST8SIA4Q92187 359 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 PRR11Q96HE9 360 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 FSD1LQ9BXM9 530 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 CDCP1Q9H5V8 836 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 CHODLQ9H9P2 273 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 PLEKHA2Q9HB19 425 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 PCDHB7Q9Y5E2 793 aa5.26□□□□□ -1.57
HMGB1P1-201ENST00000522557 WNT6Q9Y6F9 365 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms