RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 C11orf54Q9H0W9 315 aaPredicted RBP3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 GSTO2Q9H4Y5 243 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 TRIOBPQ9H2D6 2365 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 CEP290O15078 2479 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 FRMPD4Q14CM0 1322 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 CDHR4A6H8M9 788 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 CCDC69A6NI79 296 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 HAS3O00219 553 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 MEIS2O14770 477 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 GRM6O15303 877 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 AP1G1O43747 822 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 SGTAO43765 313 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 DTNBO60941 627 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 STAM2O75886 525 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 GGPS1O95749 300 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 RPLP2P05387 115 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 CD1AP06126 327 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 HMGB1P09429 215 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 IQCF3P0C7M6 154 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 TGFB3P10600 412 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 RXRAP19793 462 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 UBA1P22314 1058 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 CCND2P30279 289 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 ICAM3P32942 547 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 RFC2P35250 354 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 ACVRL1P37023 503 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 GNAQP50148 359 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 EVCP57679 992 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 TLE1Q04724 770 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 BFSP2Q13515 415 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 TUBA3CQ13748 450 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 KRT32Q14532 448 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 GPNMBQ14956 572 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 KIAA0753Q2KHM9 967 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 HSDL1Q3SXM5 330 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 PDCD4Q53EL6 469 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 MIIPQ5JXC2 388 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 FAM102AQ5T9C2 384 aaPredicted RBP3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 METRNLQ641Q3 311 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 TUBA3EQ6PEY2 450 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 USP17L6PQ6QN14 398 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 TMTC3Q6ZXV5 915 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 DEFB128Q7Z7B8 93 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 RAB11FIP4Q86YS3 637 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 TBC1D15Q8TC07 691 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 TIFAQ96CG3 184 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 SPATA33Q96N06 139 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 INPP4AQ96PE3 977 aaPredicted RBP3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 DCLRE1CQ96SD1 692 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 C16orf70Q9BSU1 422 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 KATNAL1Q9BW62 490 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 LRRC2Q9BYS8 371 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 CDH19Q9H159 772 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 MTIF3Q9H2K0 278 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 ZNF703Q9H7S9 590 aaPredicted RBP3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 NRDE2Q9H7Z3 1164 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 PSTPIP2Q9H939 334 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 MLXIPQ9HAP2 919 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 TCF7L1Q9HCS4 588 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 HDAC6Q9UBN7 1215 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 SEC63Q9UGP8 760 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 PCDHA3Q9Y5H8 950 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 SNX14Q9Y5W7 946 aa3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 CFAP20Q9Y6A4 193 aaKnown RBP3.95□□□□□ -1.78
UBE2D3-226ENST00000508635 COL6A3P12111 3177 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 hCG_1642624A0A1W2PR95 340 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 E2F8A0AVK6 867 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 TRIM24O15164 1050 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 FIBPO43427 364 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 NBNO60934 754 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 NCR1O76036 304 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 ZNF202O95125 648 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 NDUFA10O95299 355 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 FTLP02792 175 aaPredicted RBP3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 ZNF286BP0CG31 522 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 MYBP10242 640 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 CKBP12277 381 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 ACTN1P12814 892 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 MYOGP15173 224 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 FOSL2P15408 326 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 MALP21145 153 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 NR4A1P22736 598 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 RPS6KB1P23443 525 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 HOXC8P31273 242 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 SLC6A4P31645 630 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 NEDD9Q14511 834 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 RAB39AQ14964 217 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 PPP2R5AQ15172 486 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 RAB30Q15771 203 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 TRIM71Q2Q1W2 868 aaKnown RBP3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 PGS1Q32NB8 556 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 CCDC157Q569K6 752 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 XRRA1Q6P2D8 792 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 APOA5Q6Q788 366 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 METTL7BQ6UX53 244 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 SYNE3Q6ZMZ3 975 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 RUFY3Q7L099 469 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 MICU3Q86XE3 530 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 PRR18Q8N4B5 295 aa3.94□□□□□ -1.78
UBE2D3-226ENST00000508635 SH2D3CQ8N5H7 860 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms