RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 PYGLP06737 847 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 FDFT1P37268 417 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 HIF1AQ16665 826 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 B3GNT5Q9BYG0 378 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 GKN1Q9NS71 199 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 RHOBTB1O94844 696 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 CFHP08603 1231 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 KCNE1P15382 129 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 MIPP30301 263 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 AARS2Q5JTZ9 985 aaKnown RBP9.7□□□□□ -0.86
NEK1-203ENST00000507142 CDKAL1Q5VV42 579 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 UBE2Q2Q8WVN8 375 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 BTN2A3PQ96KV6 586 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 CDCA3Q99618 268 aaPredicted RBP9.7□□□□□ -0.86
NEK1-203ENST00000507142 PACSIN1Q9BY11 444 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 ZCCHC2Q9C0B9 1178 aaKnown RBP9.7□□□□□ -0.86
NEK1-203ENST00000507142 MAP10Q9P2G4 905 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.7□□□□□ -0.86
NEK1-203ENST00000507142 BAZ2AQ9UIF9 1905 aaKnown RBP9.7□□□□□ -0.86
NEK1-203ENST00000507142 GNSP15586 552 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 SPIRE1Q08AE8 756 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 MTM1Q13496 603 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 CCDC6Q16204 474 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 SEMA4DQ92854 862 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 FCRL2Q96LA5 508 aaPredicted RBP9.7□□□□□ -0.86
NEK1-203ENST00000507142 HNRNPABQ99729 332 aaKnown RBP9.7□□□□□ -0.86
NEK1-203ENST00000507142 LMAN2LQ9H0V9 348 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 ATP13A3Q9H7F0 1226 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 HALP42357 657 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 RBBP7Q16576 425 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 TTLL9Q3SXZ7 439 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 SPOCD1Q6ZMY3 1216 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 LRRC55Q6ZSA7 311 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 METTL3Q86U44 580 aaKnown RBP9.7□□□□□ -0.86
NEK1-203ENST00000507142 PRPF39Q86UA1 669 aaKnown RBP9.7□□□□□ -0.86
NEK1-203ENST00000507142 ARMC5Q96C12 935 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 GPR62Q9BZJ7 368 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 MPP6Q9NZW5 540 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 GPSM3Q9Y4H4 160 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 LAMTOR5O43504 91 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 PAGE1O75459 146 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 RHOP08100 348 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 CASP2P42575 452 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 MATKP42679 507 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 ZNF135P52742 658 aaPredicted RBP9.69□□□□□ -0.86
NEK1-203ENST00000507142 STX1BP61266 288 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 CBX1P83916 185 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 CENPCQ03188 943 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 PRKAA1Q13131 559 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 RAET1GQ6H3X3 334 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 RNF19BQ6ZMZ0 732 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 POLR1EQ9GZS1 481 aaKnown RBP9.69□□□□□ -0.86
NEK1-203ENST00000507142 TDP1Q9NUW8 608 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 LRRC72A6NJI9 287 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 PDE2AO00408 941 aaPredicted RBP9.69□□□□□ -0.86
NEK1-203ENST00000507142 PPEF2O14830 753 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 TMCC1O94876 653 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 C1RP00736 705 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 HNRNPA1P09651 372 aaKnown RBP eCLIP9.69□□□□□ -0.86
NEK1-203ENST00000507142 TROVE2P10155 538 aaKnown RBP eCLIP9.69□□□□□ -0.86
NEK1-203ENST00000507142 OTUD4Q01804 1114 aaKnown RBP9.69□□□□□ -0.86
NEK1-203ENST00000507142 USP4Q13107 963 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 LBRQ14739 615 aaKnown RBP9.69□□□□□ -0.86
NEK1-203ENST00000507142 HABP4Q5JVS0 413 aaKnown RBP9.69□□□□□ -0.86
NEK1-203ENST00000507142 DAW1Q8N136 415 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 ZNF669Q96BR6 464 aaPredicted RBP9.69□□□□□ -0.86
NEK1-203ENST00000507142 CLPBQ9H078 707 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.69□□□□□ -0.86
NEK1-203ENST00000507142 TRIM10Q9UDY6 481 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 PAPPA2Q9BXP8 1791 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 TEX28O15482 410 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 CLDN11O75508 207 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 TADA3O75528 432 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 TRIM16O95361 564 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 ATP1A1P05023 1023 aaKnown RBP9.69□□□□□ -0.86
NEK1-203ENST00000507142 GPR17Q13304 367 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 NNTQ13423 1086 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 PDGFRLQ15198 375 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 SOWAHAQ2M3V2 549 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 KLHL38Q2WGJ6 581 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 LCLAT1Q6UWP7 414 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 C4orf22Q6V702 233 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 ANKS1BQ7Z6G8 1248 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 TPCN2Q8NHX9 752 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 TMEM40Q8WWA1 233 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 TASP1Q9H6P5 420 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 ZC3H7BQ9UGR2 993 aaKnown RBP9.69□□□□□ -0.86
NEK1-203ENST00000507142 GMEB2Q9UKD1 530 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 VPS9D1Q9Y2B5 631 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 TAF1P21675 1872 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 M0R2N6 131 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 ACSL4O60488 711 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 ZNF623O75123 536 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 SMIM24O75264 130 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 SRP72O76094 671 aaKnown RBP9.69□□□□□ -0.86
NEK1-203ENST00000507142 GFAPP14136 432 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 HOXB8P17481 243 aaPredicted RBP9.69□□□□□ -0.86
NEK1-203ENST00000507142 TYK2P29597 1187 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 PHEXP78562 749 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 BRD3Q15059 726 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms