RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 RSPH3Q86UC2 560 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 LRRC43Q8N309 656 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 SLC44A3Q8N4M1 653 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 MYCT1Q8N699 235 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 PAF1Q8N7H5 531 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 TEX19Q8NA77 164 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 GAB3Q8WWW8 586 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 SEPT1Q8WYJ6 367 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 GLG1Q92896 1179 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 CUL5Q93034 780 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 HDAC10Q969S8 669 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 LENG9Q96B70 501 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 CDK5RAP3Q96JB5 506 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 CDCA3Q99618 268 aaPredicted RBP4.71□□□□□ -1.66
VPS52-222ENST00000495981 MXRA8Q9BRK3 442 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 LZTS2Q9BRK4 669 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 SOX7Q9BT81 388 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 RPP25Q9BUL9 199 aaKnown RBP4.71□□□□□ -1.66
VPS52-222ENST00000495981 LRRC2Q9BYS8 371 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 HAPLN2Q9GZV7 340 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 CWH43Q9H720 699 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 PSTPIP2Q9H939 334 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 ARFGAP3Q9NP61 516 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 TNFRSF12AQ9NP84 129 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 SLC39A2Q9NP94 309 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 RIC8AQ9NPQ8 531 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 TPSG1Q9NRR2 321 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 RGS18Q9NS28 235 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 HSPBP1Q9NZL4 362 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 WNT16Q9UBV4 365 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 TMEM59LQ9UK28 342 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 VAV3Q9UKW4 847 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 PCDHB6Q9Y5E3 794 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 UBR5O95071 2799 aaPredicted RBP4.71□□□□□ -1.66
VPS52-222ENST00000495981 DOCK8Q8NF50 2099 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 ESYT2A0FGR8 921 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 FSD2A1L4K1 749 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 SHISA7A6NL88 538 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 PRRT4C9JH25 899 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 M0QZ92 97 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 EDIL3O43854 480 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 B4GALT3O60512 393 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 GPR32O75388 356 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 CALM1P0DP23 149 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 CALM2P0DP24 149 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 CALM3P0DP25 149 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 TDGF1P13385 188 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 LAG3P18627 525 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 CD72P21854 359 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 MCM5P33992 734 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 GNAQP50148 359 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 CLCN3P51790 818 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 ADCY7P51828 1080 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 BNIP3Q12983 259 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 FZD5Q13467 585 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 BIRC3Q13489 604 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 SLC9A5Q14940 896 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 NECTIN1Q15223 517 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 UGCGQ16739 394 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 MSMPQ1L6U9 139 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 CEP55Q53EZ4 464 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 HIBCHQ6NVY1 386 aaPredicted RBP4.7□□□□□ -1.66
VPS52-222ENST00000495981 ABHD15Q6UXT9 468 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 TMC5Q6UXY8 1006 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 LRRC55Q6ZSA7 311 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 TMEM173Q86WV6 379 aaPredicted RBP4.7□□□□□ -1.66
VPS52-222ENST00000495981 CELF5Q8N6W0 485 aaKnown RBP4.7□□□□□ -1.66
VPS52-222ENST00000495981 BCL7CQ8WUZ0 217 aaPredicted RBP4.7□□□□□ -1.66
VPS52-222ENST00000495981 RUFY2Q8WXA3 655 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 TCEANC2Q96MN5 208 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 NECTIN4Q96NY8 510 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 ALPK1Q96QP1 1244 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 MYADMQ96S97 322 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 PPP1R16BQ96T49 567 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 TCF25Q9BQ70 676 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 SDF4Q9BRK5 362 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 KMT5AQ9NQR1 393 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 SEMA4GQ9NTN9 838 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 C19orf73Q9NVV2 129 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 TMEM161AQ9NX61 479 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 BARHL2Q9NY43 387 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.7□□□□□ -1.66
VPS52-222ENST00000495981 SIK3Q9Y2K2 1263 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 LRCH1Q9Y2L9 728 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 PCDHGB2Q9Y5G2 931 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 SPTAN1Q13813 2472 aaKnown RBP4.7□□□□□ -1.66
VPS52-222ENST00000495981 FANCMQ8IYD8 2048 aa4.7□□□□□ -1.66
VPS52-222ENST00000495981 ZC3H12DA2A288 527 aaKnown RBP4.69□□□□□ -1.66
VPS52-222ENST00000495981 CCDC69A6NI79 296 aa4.69□□□□□ -1.66
VPS52-222ENST00000495981 TBKBP1A7MCY6 615 aa4.69□□□□□ -1.66
VPS52-222ENST00000495981 ZNF839A8K0R7 811 aa4.69□□□□□ -1.66
VPS52-222ENST00000495981 hCG_1984214I3L0E3 225 aa4.69□□□□□ -1.66
VPS52-222ENST00000495981 M0R3H8 397 aa4.69□□□□□ -1.66
VPS52-222ENST00000495981 DDX39AO00148 427 aaKnown RBP4.69□□□□□ -1.66
VPS52-222ENST00000495981 SLC16A6O15403 523 aa4.69□□□□□ -1.66
VPS52-222ENST00000495981 MAFGO15525 162 aa4.69□□□□□ -1.66
VPS52-222ENST00000495981 HBP1O60381 514 aa4.69□□□□□ -1.66
VPS52-222ENST00000495981 RPS6KA5O75582 802 aa4.69□□□□□ -1.66
VPS52-222ENST00000495981 C1QL1O75973 258 aa4.69□□□□□ -1.66
VPS52-222ENST00000495981 KCNK5O95279 499 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms