RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 DLGAP3O95886 979 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 RHOCP08134 193 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 CXCR2P25025 360 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 ARMC3Q5W041 872 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 CASP12Q6UXS9 341 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 ZNF655Q8N720 491 aaPredicted RBP9.06□□□□□ -0.96
LSAMP-205ENST00000490035 SOCS4Q8WXH5 440 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 ABI2Q9NYB9 513 aaPredicted RBP9.06□□□□□ -0.96
LSAMP-205ENST00000490035 ARHGAP28Q9P2N2 729 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 CRYL1Q9Y2S2 319 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 SYNDIG1LA6NDD5 238 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 PDE5AO76074 875 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 ZNF24P17028 368 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 PAICSP22234 425 aaKnown RBP9.06□□□□□ -0.96
LSAMP-205ENST00000490035 INAQ16352 499 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 PABPC1LQ4VXU2 614 aaKnown RBP9.06□□□□□ -0.96
LSAMP-205ENST00000490035 PDZK1Q5T2W1 519 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 TRIQKQ629K1 86 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 LRRC34Q8IZ02 419 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 SLC25A23Q9BV35 468 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 VAV3Q9UKW4 847 aa9.06□□□□□ -0.96
LSAMP-205ENST00000490035 CLTBP09497 229 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 SERPINB5P36952 375 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 ALDH6A1Q02252 535 aaKnown RBP9.05□□□□□ -0.96
LSAMP-205ENST00000490035 SLC34A1Q06495 639 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 ALG11Q2TAA5 492 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 SPANXN2Q5MJ10 180 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 LRRC38Q5VT99 294 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 KATNAL2Q8IYT4 538 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 RDH11Q8TC12 318 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 FAM120BQ96EK7 910 aaKnown RBP9.05□□□□□ -0.96
LSAMP-205ENST00000490035 IRX2Q9BZI1 471 aaPredicted RBP9.05□□□□□ -0.96
LSAMP-205ENST00000490035 PRDM8Q9NQV8 689 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 PSME2Q9UL46 239 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 PCDHB12Q9Y5F1 795 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 ST3GAL1Q11201 340 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 XRCC4Q13426 336 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 FAM187BQ17R55 369 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 PPP1R15BQ5SWA1 713 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 ANGEL2Q5VTE6 544 aaKnown RBP9.05□□□□□ -0.96
LSAMP-205ENST00000490035 RFWD2Q8NHY2 731 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 ATL1Q8WXF7 558 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 RORBQ92753 470 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 UROC1Q96N76 676 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 CROTQ9UKG9 612 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 IRGMA1A4Y4 181 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 DNALI1O14645 258 aaPredicted RBP9.05□□□□□ -0.96
LSAMP-205ENST00000490035 ABHD2P08910 425 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 ACAT1P24752 427 aaKnown RBP9.05□□□□□ -0.96
LSAMP-205ENST00000490035 CYP2F1P24903 491 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 TUFMP49411 452 aaKnown RBP9.05□□□□□ -0.96
LSAMP-205ENST00000490035 KRT74Q7RTS7 529 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 KDELC2Q7Z4H8 507 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 ATG16L2Q8NAA4 619 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 RPS6KA6Q9UK32 745 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 PSMD12O00232 456 aaPredicted RBP9.05□□□□□ -0.96
LSAMP-205ENST00000490035 SARSP49591 514 aaKnown RBP9.05□□□□□ -0.96
LSAMP-205ENST00000490035 AQP5P55064 265 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 ARCQ7LC44 396 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 ZDHHC13Q8IUH4 622 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 ZCCHC9Q8N567 271 aaKnown RBP9.05□□□□□ -0.96
LSAMP-205ENST00000490035 USP33Q8TEY7 942 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 PADI4Q9UM07 663 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 ZNF232Q9UNY5 417 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 LDLRP01130 860 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 ALDH2P05091 517 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 KCNJ1P48048 391 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 AIF1P55008 147 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 TBL3Q12788 808 aaKnown RBP9.05□□□□□ -0.96
LSAMP-205ENST00000490035 PLEKHH3Q7Z736 793 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 PIGUQ9H490 435 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 SERHL2Q9H4I8 314 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 SERHLQ9NQF3 203 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 BTBD7Q9P203 1132 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 MYRFQ9Y2G1 1151 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 CHD4Q14839 1912 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 APOC4-APOC2K7ER74 178 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 RIPK2O43353 540 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 GRAP2O75791 330 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 APOC2P02655 101 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 FYNP06241 537 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 RFX5P48382 616 aaPredicted RBP9.05□□□□□ -0.96
LSAMP-205ENST00000490035 SNX30Q5VWJ9 437 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 PPP4R4Q6NUP7 873 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 TMEM120AQ9BXJ8 343 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 GNG14A0A1W2PPG7 69 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 SLC9A3R1O14745 358 aaPredicted RBP9.05□□□□□ -0.96
LSAMP-205ENST00000490035 MLYCDO95822 493 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 KLHL12Q53G59 568 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 DENND5BQ6ZUT9 1274 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 NT5DC3Q86UY8 548 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 SERAC1Q96JX3 654 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 TINF2Q9BSI4 451 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 MRIQ9BWK5 157 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 TMEM134Q9H6X4 195 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 DLG5Q8TDM6 1919 aa9.05□□□□□ -0.96
LSAMP-205ENST00000490035 E9PBE3 544 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 SYNCRIPO60506 623 aaKnown RBP9.04□□□□□ -0.96
LSAMP-205ENST00000490035 RAMP2O60895 175 aa9.04□□□□□ -0.96
LSAMP-205ENST00000490035 ITGA2P17301 1181 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms