RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 OSCP1Q8WVF1 389 aa15.49■□□□□ 0.07
RXRA-203ENST00000484822 HDHD2Q9H0R4 259 aa15.49■□□□□ 0.07
RXRA-203ENST00000484822 RMI1Q9H9A7 625 aa15.49■□□□□ 0.07
RXRA-203ENST00000484822 MRC1P22897 1456 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 C17orf102A2RUQ5 167 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 H7C4K7 107 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 ATP6V1C1P21283 382 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 TALDO1P37837 337 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.48■□□□□ 0.07
RXRA-203ENST00000484822 PRKAA1Q13131 559 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 FAM98BQ52LJ0 330 aaKnown RBP15.48■□□□□ 0.07
RXRA-203ENST00000484822 MRNIPQ6NTE8 343 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 VPS33AQ96AX1 596 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 CENPTQ96BT3 561 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 FAM120BQ96EK7 910 aaKnown RBP15.48■□□□□ 0.07
RXRA-203ENST00000484822 PIH1D1Q9NWS0 290 aaKnown RBP15.48■□□□□ 0.07
RXRA-203ENST00000484822 DDIT4Q9NX09 232 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 CCDC167Q9P0B6 97 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 TRIM13O60858 407 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 ATG7O95352 703 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 ALDH1A3P47895 512 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 KLHL17Q6TDP4 642 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 ENKURQ8TC29 256 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 FAM172AQ8WUF8 416 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 PPP1R10Q96QC0 940 aaKnown RBP15.48■□□□□ 0.07
RXRA-203ENST00000484822 GINS4Q9BRT9 223 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 UBE2OQ9C0C9 1292 aaKnown RBP15.48■□□□□ 0.07
RXRA-203ENST00000484822 LRMDAQ9H2I8 198 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.48■□□□□ 0.072e-6■■■■□ 20.7
RXRA-203ENST00000484822 TMCC3Q9ULS5 477 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 USP18Q9UMW8 372 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 HS6ST1O60243 411 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 DRD4P21917 467 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 FASTKQ14296 549 aaKnown RBP15.48■□□□□ 0.07
RXRA-203ENST00000484822 ARHGEF19Q8IW93 802 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 RNFT2Q96EX2 444 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 COMMD8Q9NX08 183 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 ZSCAN32Q9NX65 697 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 KLHL20Q9Y2M5 609 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 GOLGA8TH3BQL2 631 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 OAZ1P54368 228 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 NFIL3Q16649 462 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 EXOC3L1Q86VI1 746 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 BHLHE22Q8NFJ8 381 aaPredicted RBP15.48■□□□□ 0.07
RXRA-203ENST00000484822 DMAP1Q9NPF5 467 aaPredicted RBP15.48■□□□□ 0.07
RXRA-203ENST00000484822 RIC1Q4ADV7 1423 aa15.48■□□□□ 0.07
RXRA-203ENST00000484822 TRIM43BA6NCK2 446 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 DDX3XO00571 662 aaKnown RBP eCLIP15.47■□□□□ 0.074e-9■■■□□ 16.1
RXRA-203ENST00000484822 CES2O00748 559 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 STX7O15400 261 aaKnown RBP15.47■□□□□ 0.07
RXRA-203ENST00000484822 LGR5O75473 907 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 CSDE1O75534 798 aaKnown RBP15.47■□□□□ 0.07
RXRA-203ENST00000484822 MZF1P28698 734 aaPredicted RBP15.47■□□□□ 0.07
RXRA-203ENST00000484822 RRM2P31350 389 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 DSG3P32926 999 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 CCT3P49368 545 aaKnown RBP15.47■□□□□ 0.07
RXRA-203ENST00000484822 TRAF3Q13114 568 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 AUHQ13825 339 aaKnown RBP15.47■□□□□ 0.07
RXRA-203ENST00000484822 DNERQ8NFT8 737 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 TRIM39Q9HCM9 518 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 CHST7Q9NS84 486 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 UBP1Q9NZI7 540 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 GGA2Q9UJY4 613 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 FAM237BA0A1B0GVD1 139 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 ERI2A8K979 691 aaKnown RBP15.47■□□□□ 0.07
RXRA-203ENST00000484822 NKRFO15226 690 aaKnown RBP eCLIP15.47■□□□□ 0.071e-6■■■□□ 15.9
RXRA-203ENST00000484822 LRG1P02750 347 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 MLNP12872 115 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 HPCAP84074 193 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 TMEM62Q0P6H9 643 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 PDK2Q15119 407 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 PGS1Q32NB8 556 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 RBM44Q6ZP01 1051 aaKnown RBP15.47■□□□□ 0.07
RXRA-203ENST00000484822 PTF1AQ7RTS3 328 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 DDX53Q86TM3 631 aaKnown RBP15.47■□□□□ 0.07
RXRA-203ENST00000484822 CD302Q8IX05 232 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 TSPAN14Q8NG11 270 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 TMEM169Q96HH4 297 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 DUSP9Q99956 384 aaKnown RBP15.47■□□□□ 0.07
RXRA-203ENST00000484822 RMND5AQ9H871 391 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 SH3BP1Q9Y3L3 701 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 STARD13Q9Y3M8 1113 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 UPP2O95045 317 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 CPSF4O95639 269 aaKnown RBP15.47■□□□□ 0.07
RXRA-203ENST00000484822 RBP1P09455 135 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 PIK3R1P27986 724 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 RPL5P46777 297 aaKnown RBP15.47■□□□□ 0.07
RXRA-203ENST00000484822 ALDH7A1P49419 539 aaKnown RBP15.47■□□□□ 0.07
RXRA-203ENST00000484822 RRP1BQ14684 758 aaKnown RBP15.47■□□□□ 0.07
RXRA-203ENST00000484822 NR1D2Q14995 579 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 AMHR2Q16671 573 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 FAM45BPQ6NSW5 357 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 UXS1Q8NBZ7 420 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 TRPC4APQ8TEL6 797 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 FNIP1Q8TF40 1166 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 FAM210AQ96ND0 272 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 MTMR12Q9C0I1 747 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 MUC3BQ9H195 1237 aa15.47■□□□□ 0.07
RXRA-203ENST00000484822 CLEC4MQ9H2X3 399 aaPredicted RBP15.47■□□□□ 0.07
RXRA-203ENST00000484822 NUMBP49757 651 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms