RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 TBRG1Q3YBR2 411 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 LRCH2Q5VUJ6 765 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 VSTM1Q6UX27 236 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 SERPINA13PQ6UXR4 307 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 SENP7Q9BQF6 1050 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 VPS16Q9H269 839 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 RRN3Q9NYV6 651 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 SH3BP4Q9P0V3 963 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 MAFFQ9ULX9 164 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 DAPP1Q9UN19 280 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 ZBTB1Q9Y2K1 713 aa7.5□□□□□ -1.21
UBR3-210ENST00000484596 CCDC187A0A096LP49 1063 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 WIPF3A6NGB9 483 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 PPP6R2O75170 966 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 FAM155BO75949 473 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 AGR2O95994 175 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 APEHP13798 732 aaKnown RBP7.49□□□□□ -1.21
UBR3-210ENST00000484596 GALNSP34059 522 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 MCM2P49736 904 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 AAK1Q2M2I8 961 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 SLC4A8Q2Y0W8 1093 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 TTC22Q5TAA0 569 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 ANKRD45Q5TZF3 282 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 WDR78Q5VTH9 848 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 JAKMIP3Q5VZ66 844 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 TMEM65Q6PI78 240 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 CLEC4GQ6UXB4 293 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 SPPL3Q8TCT6 385 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 THAP4Q8WY91 577 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 DPF1Q92782 380 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 C3orf49Q96BT1 292 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 ADGRE3Q9BY15 652 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 TAF1DQ9H5J8 278 aaPredicted RBP7.49□□□□□ -1.21
UBR3-210ENST00000484596 TMLHEQ9NVH6 421 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 PCDHB7Q9Y5E2 793 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 PCDHB2Q9Y5E7 798 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 LRRFIP2Q9Y608 721 aaKnown RBP7.49□□□□□ -1.21
UBR3-210ENST00000484596 AOX1Q06278 1338 aa7.49□□□□□ -1.21
UBR3-210ENST00000484596 LOC105369274A0A096LPK9 316 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 LOC102723532A0A0G2JNH3 316 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 MANSC4A6NHS7 340 aaPredicted RBP7.48□□□□□ -1.21
UBR3-210ENST00000484596 KIF28PB7ZC32 967 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 POC1B-GALNT4F8VUJ3 575 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 NKX2-8O15522 239 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 PRAMEF2O60811 474 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 GCATO75600 419 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 SLC3A2P08195 630 aaKnown RBP7.48□□□□□ -1.21
UBR3-210ENST00000484596 ALADP13716 330 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 THBS4P35443 961 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 ABCG1P45844 678 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 RBM6P78332 1123 aaKnown RBP7.48□□□□□ -1.21
UBR3-210ENST00000484596 MFSD13AQ14CX5 517 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 WDR93Q6P2C0 686 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 PTF1AQ7RTS3 328 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 OR4N4Q8N0Y3 316 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 GALNT4Q8N4A0 578 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 MAFAQ8NHW3 353 aaPredicted RBP7.48□□□□□ -1.21
UBR3-210ENST00000484596 NPIPB3Q92617 1050 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 REPS1Q96D71 796 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 PRR11Q96HE9 360 aaPredicted RBP7.48□□□□□ -1.21
UBR3-210ENST00000484596 MACROD1Q9BQ69 325 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 ITM2CQ9NQX7 267 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 ABHD10Q9NUJ1 306 aa7.48□□□□□ -1.21
UBR3-210ENST00000484596 COL3A1P02461 1466 aaPredicted RBP7.48□□□□□ -1.21
UBR3-210ENST00000484596 DNAJC9-AS1A6NH13 148 aa7.47□□□□□ -1.21
UBR3-210ENST00000484596 PRRT4C9JH25 899 aa7.47□□□□□ -1.21
UBR3-210ENST00000484596 CLIC1O00299 241 aa7.47□□□□□ -1.21
UBR3-210ENST00000484596 CHRM5P08912 532 aaPredicted RBP7.47□□□□□ -1.21
UBR3-210ENST00000484596 SERPINA4P29622 427 aa7.47□□□□□ -1.21
UBR3-210ENST00000484596 ADD2P35612 726 aa7.47□□□□□ -1.21
UBR3-210ENST00000484596 AARSP49588 968 aaKnown RBP eCLIP7.47□□□□□ -1.21
UBR3-210ENST00000484596 KCNB1Q14721 858 aa7.47□□□□□ -1.21
UBR3-210ENST00000484596 LARS2Q15031 903 aaKnown RBP7.47□□□□□ -1.21
UBR3-210ENST00000484596 CERKLQ49MI3 558 aaPredicted RBP7.47□□□□□ -1.21
UBR3-210ENST00000484596 ANKRD40Q6AI12 368 aa7.47□□□□□ -1.21
UBR3-210ENST00000484596 FCRLBQ6BAA4 426 aa7.47□□□□□ -1.21
UBR3-210ENST00000484596 CYP26C1Q6V0L0 522 aa7.47□□□□□ -1.21
UBR3-210ENST00000484596 DCDC5Q6ZRR9 648 aa7.47□□□□□ -1.21
UBR3-210ENST00000484596 HASPINQ8TF76 798 aa7.47□□□□□ -1.21
UBR3-210ENST00000484596 HIC2Q96JB3 615 aa7.47□□□□□ -1.21
UBR3-210ENST00000484596 MPP4Q96JB8 637 aa7.47□□□□□ -1.21
UBR3-210ENST00000484596 ZSCAN31Q96LW9 406 aaPredicted RBP7.47□□□□□ -1.21
UBR3-210ENST00000484596 CDCP1Q9H5V8 836 aa7.47□□□□□ -1.21
UBR3-210ENST00000484596 SEMA5BQ9P283 1151 aa7.47□□□□□ -1.21
UBR3-210ENST00000484596 BAG5Q9UL15 447 aa7.47□□□□□ -1.21
UBR3-210ENST00000484596 VPS4AQ9UN37 437 aa7.47□□□□□ -1.21
UBR3-210ENST00000484596 C3orf70A6NLC5 250 aaPredicted RBP7.46□□□□□ -1.22
UBR3-210ENST00000484596 H0Y3Z8 333 aa7.46□□□□□ -1.22
UBR3-210ENST00000484596 FYB1O15117 783 aa7.46□□□□□ -1.22
UBR3-210ENST00000484596 MBPP02686 304 aaPredicted RBP7.46□□□□□ -1.22
UBR3-210ENST00000484596 WDR5P61964 334 aaKnown RBP7.46□□□□□ -1.22
UBR3-210ENST00000484596 RAE1P78406 368 aaKnown RBP7.46□□□□□ -1.22
UBR3-210ENST00000484596 TLE3Q04726 772 aa7.46□□□□□ -1.22
UBR3-210ENST00000484596 EFR3AQ14156 821 aa7.46□□□□□ -1.22
UBR3-210ENST00000484596 CNGA3Q16281 694 aa7.46□□□□□ -1.22
UBR3-210ENST00000484596 MOGAT3Q86VF5 341 aa7.46□□□□□ -1.22
UBR3-210ENST00000484596 SRFBP1Q8NEF9 429 aaKnown RBP7.46□□□□□ -1.22
UBR3-210ENST00000484596 IL17REQ8NFR9 667 aa7.46□□□□□ -1.22
UBR3-210ENST00000484596 KAZALD1Q96I82 304 aa7.46□□□□□ -1.22
UBR3-210ENST00000484596 UBXN10Q96LJ8 280 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms