RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 FZD10Q9ULW2 581 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 NME7Q9Y5B8 376 aa15.82■□□□□ 0.12
C9orf3-218ENST00000482056 PPP1R12AO14974 1030 aaPredicted RBP15.81■□□□□ 0.12
C9orf3-218ENST00000482056 MAP3K7O43318 606 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 PDGFRBP09619 1106 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 PAX7P23759 505 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 ADCYAP1R1P41586 468 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 GRIA1P42261 906 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 CPA2P48052 419 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 PDE1BQ01064 536 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 AP1B1Q10567 949 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 INSCQ1MX18 579 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 SLC25A52Q3SY17 297 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 MARCH8Q5T0T0 291 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 MAMDC4Q6UXC1 1216 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 PACS1Q6VY07 963 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 GPRC5AQ8NFJ5 357 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 C18orf25Q96B23 403 aaPredicted RBP15.81■□□□□ 0.12
C9orf3-218ENST00000482056 TSPAN18Q96SJ8 248 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 TRIM56Q9BRZ2 755 aaKnown RBP15.81■□□□□ 0.12
C9orf3-218ENST00000482056 CCDC106Q9BWC9 280 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 C1orf21Q9H246 121 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.81■□□□□ 0.12
C9orf3-218ENST00000482056 GINS2Q9Y248 185 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 LRCH1Q9Y2L9 728 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 USP3Q9Y6I4 520 aa15.81■□□□□ 0.12
C9orf3-218ENST00000482056 SF3B1O75533 1304 aaKnown RBP eCLIP15.81■□□□□ 0.12
C9orf3-218ENST00000482056 KPNA7A9QM74 516 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 RNF103O00237 685 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 DAB1O75553 588 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 TM7SF2O76062 418 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 DDNO94850 711 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-218ENST00000482056 KLHL2O95198 593 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 VAV1P15498 845 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 GRK2P25098 689 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 ADORA2AP29274 412 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 CDC25CP30307 473 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 HOXA11P31270 313 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-218ENST00000482056 GLUD2P49448 558 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 SESN2P58004 480 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-218ENST00000482056 KDSRQ06136 332 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 IFRD2Q12894 506 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-218ENST00000482056 N4BP2L1Q5TBK1 243 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-218ENST00000482056 ANO7Q6IWH7 933 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 IRGCQ6NXR0 463 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 RASSF3Q86WH2 238 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 TREML1Q86YW5 311 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 CCDC33Q8N5R6 958 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 RBM15BQ8NDT2 890 aaKnown RBP15.8■□□□□ 0.12
C9orf3-218ENST00000482056 APPL2Q8NEU8 664 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 PIWIL2Q8TC59 973 aaKnown RBP15.8■□□□□ 0.12
C9orf3-218ENST00000482056 WDR60Q8WVS4 1066 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 FAM149B1Q96BN6 582 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 A6NHS1 94 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 TPP1O14773 563 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 XPO1O14980 1071 aaKnown RBP15.8■□□□□ 0.12
C9orf3-218ENST00000482056 NEBLO76041 1014 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 POLBP06746 335 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 MGAT1P26572 445 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 SLC1A6P48664 564 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 IRX4P78413 519 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 SNAPC2Q13487 334 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 DGKDQ16760 1214 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 HSF5Q4G112 596 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-218ENST00000482056 GLRA4Q5JXX5 417 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 CES4AQ5XG92 561 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 MBLAC2Q68D91 279 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 ZCCHC23Q6ZST2 131 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 PDZD4Q76G19 769 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-218ENST00000482056 ZNF467Q7Z7K2 595 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-218ENST00000482056 FAM131BQ86XD5 332 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 SLC2A14Q8TDB8 520 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 SCG3Q8WXD2 468 aaKnown RBP15.8■□□□□ 0.12
C9orf3-218ENST00000482056 CDCA5Q96FF9 252 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 LGMNQ99538 433 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 LPIN3Q9BQK8 851 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 VCXQ9H320 206 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 ADAMTS10Q9H324 1103 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 ZNF395Q9H8N7 513 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-218ENST00000482056 GDAP2Q9NXN4 497 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 STAP1Q9ULZ2 295 aa15.8■□□□□ 0.12
C9orf3-218ENST00000482056 APOBEC2Q9Y235 224 aaKnown RBP15.8■□□□□ 0.12
C9orf3-218ENST00000482056 PLXNB2O15031 1838 aa15.79■□□□□ 0.12
C9orf3-218ENST00000482056 MFSD11O43934 449 aa15.79■□□□□ 0.12
C9orf3-218ENST00000482056 PLIN3O60664 434 aa15.79■□□□□ 0.12
C9orf3-218ENST00000482056 RECQL4O94761 1208 aa15.79■□□□□ 0.12
C9orf3-218ENST00000482056 SERPINE1P05121 402 aa15.79■□□□□ 0.12
C9orf3-218ENST00000482056 AOC1P19801 751 aa15.79■□□□□ 0.12
C9orf3-218ENST00000482056 SV2CQ496J9 727 aa15.79■□□□□ 0.12
C9orf3-218ENST00000482056 SPANXN3Q5MJ09 141 aa15.79■□□□□ 0.12
C9orf3-218ENST00000482056 ALKAL1Q6UXT8 129 aa15.79■□□□□ 0.12
C9orf3-218ENST00000482056 MOB2Q70IA6 237 aa15.79■□□□□ 0.12
C9orf3-218ENST00000482056 DEFB106AQ8N104 65 aa15.79■□□□□ 0.12
C9orf3-218ENST00000482056 PYROXD2Q8N2H3 581 aa15.79■□□□□ 0.12
C9orf3-218ENST00000482056 CCNYQ8ND76 341 aa15.79■□□□□ 0.12
C9orf3-218ENST00000482056 RNF139Q8WU17 664 aa15.79■□□□□ 0.12
C9orf3-218ENST00000482056 KBTBD7Q8WVZ9 684 aa15.79■□□□□ 0.12
C9orf3-218ENST00000482056 P2RY11Q96G91 374 aa15.79■□□□□ 0.12
C9orf3-218ENST00000482056 EIF2AQ9BY44 585 aaKnown RBP15.79■□□□□ 0.12
C9orf3-218ENST00000482056 SEPT10Q9P0V9 454 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms