RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ZBTB42B2RXF5 422 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 E5RJQ4 531 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 K7ERI5 159 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 AP1G1O43747 822 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 CST8O60676 142 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 TM7SF2O76062 418 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 HAUS5O94927 633 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 ARIH2O95376 493 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 PARNO95453 639 aaKnown RBP7.1□□□□□ -1.27
UBR4-212ENST00000475973 CYP2C9P11712 490 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 MYCLP12524 364 aaPredicted RBP7.1□□□□□ -1.27
UBR4-212ENST00000475973 AOC1P19801 751 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 SP100P23497 879 aaPredicted RBP7.1□□□□□ -1.27
UBR4-212ENST00000475973 BRD2P25440 801 aaKnown RBP7.1□□□□□ -1.27
UBR4-212ENST00000475973 CRABP2P29373 138 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 CRHR1P34998 444 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 SERPINB4P48594 390 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 CSRP3P50461 194 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 TUBP50607 506 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 ZNF143P52747 638 aaPredicted RBP7.1□□□□□ -1.27
UBR4-212ENST00000475973 ARFIP2P53365 341 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 MYL6P60660 151 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 ACTR3P61158 418 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 MRPS5P82675 430 aaKnown RBP7.1□□□□□ -1.27
UBR4-212ENST00000475973 KLC1Q07866 573 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 INCA1Q0VD86 236 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 WASHC5Q12768 1159 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 LAMC2Q13753 1193 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 FRG1Q14331 258 aaKnown RBP7.1□□□□□ -1.27
UBR4-212ENST00000475973 EFTUD2Q15029 972 aaKnown RBP eCLIP7.1□□□□□ -1.271e-6■□□□□ 8.1
UBR4-212ENST00000475973 DGKDQ16760 1214 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 HADHQ16836 314 aaKnown RBP7.1□□□□□ -1.27
UBR4-212ENST00000475973 FAM187BQ17R55 369 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 DUOXA2Q1HG44 320 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 PKDCCQ504Y2 493 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 RABGAP1LQ5R372 815 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 RASIP1Q5U651 963 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 SNX30Q5VWJ9 437 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 FYB2Q5VWT5 728 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 IER5Q5VY09 327 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 DENND1BQ6P3S1 775 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 AAGABQ6PD74 315 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 ZNF534Q76KX8 674 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 OTOP2Q7RTS6 562 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 GSTA5Q7RTV2 222 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 PHLDB2Q86SQ0 1253 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 CAND1Q86VP6 1230 aaKnown RBP7.1□□□□□ -1.27
UBR4-212ENST00000475973 LRRC6Q86X45 466 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 TREML1Q86YW5 311 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 PASD1Q8IV76 773 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 TRIM42Q8IWZ5 723 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 DHX37Q8IY37 1157 aaKnown RBP7.1□□□□□ -1.27
UBR4-212ENST00000475973 PDIK1LQ8N165 341 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 CEP120Q8N960 986 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 PPTC7Q8NI37 304 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 SLC7A14Q8TBB6 771 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 WDR60Q8WVS4 1066 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 SLC7A3Q8WY07 619 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 COPS5Q92905 334 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 EMID1Q96A84 441 aaPredicted RBP7.1□□□□□ -1.27
UBR4-212ENST00000475973 MTBPQ96DY7 904 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 SPDL1Q96EA4 605 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 OXNAD1Q96HP4 312 aaPredicted RBP7.1□□□□□ -1.27
UBR4-212ENST00000475973 SIGLEC10Q96LC7 697 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 NLRP4Q96MN2 994 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 TRAPPC9Q96Q05 1148 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 MSTO1Q9BUK6 570 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 TSSK1BQ9BXA7 367 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 TMEM120AQ9BXJ8 343 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 PBX4Q9BYU1 374 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 EPB41L1Q9H4G0 881 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 VPS37BQ9H9H4 285 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 SLC28A3Q9HAS3 691 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 CYP3A43Q9HB55 503 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.1□□□□□ -1.27
UBR4-212ENST00000475973 TRMT13Q9NUP7 481 aaKnown RBP7.1□□□□□ -1.27
UBR4-212ENST00000475973 NMRK1Q9NWW6 199 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 HCSTQ9UBK5 93 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 SIX4Q9UIU6 781 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 SSX2IPQ9Y2D8 614 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 SLC4A7Q9Y6M7 1214 aa7.1□□□□□ -1.27
UBR4-212ENST00000475973 KIAA1217Q5T5P2 1943 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 FAM170AA1A519 330 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 LRRD1A4D1F6 860 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 SDR42E2A6NKP2 422 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 C2CD4BA6NLJ0 364 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 FCHO1O14526 889 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 ZNF195O14628 629 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 CASQ2O14958 399 aaPredicted RBP7.09□□□□□ -1.27
UBR4-212ENST00000475973 NVLO15381 856 aaKnown RBP7.09□□□□□ -1.27
UBR4-212ENST00000475973 CCNT2O60583 730 aaKnown RBP7.09□□□□□ -1.27
UBR4-212ENST00000475973 CILPO75339 1184 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 BANF1O75531 89 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 GCATO75600 419 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 MT-ND3P03897 115 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 PRKCGP05129 697 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 SNRPAP09012 282 aaKnown RBP7.09□□□□□ -1.27
UBR4-212ENST00000475973 CD48P09326 243 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 TGFB3P10600 412 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 RBP3P10745 1247 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms