RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 SPTLC2O15270 562 aa15.12■□□□□ 0.01
SMC1A-204ENST00000463684 TLX3O43711 291 aaPredicted RBP15.12■□□□□ 0.01
SMC1A-204ENST00000463684 HLA-DRAP01903 254 aa15.12■□□□□ 0.01
SMC1A-204ENST00000463684 CD58P19256 250 aa15.12■□□□□ 0.01
SMC1A-204ENST00000463684 HLA-FP30511 346 aa15.12■□□□□ 0.01
SMC1A-204ENST00000463684 NASPP49321 788 aaPredicted RBP15.12■□□□□ 0.01
SMC1A-204ENST00000463684 ZNF445P59923 1031 aa15.12■□□□□ 0.01
SMC1A-204ENST00000463684 YWHAGP61981 247 aaKnown RBP eCLIP15.12■□□□□ 0.01
SMC1A-204ENST00000463684 DNAJC3Q13217 504 aa15.12■□□□□ 0.01
SMC1A-204ENST00000463684 RTP5Q14D33 572 aa15.12■□□□□ 0.01
SMC1A-204ENST00000463684 PRAMEF14Q5SWL7 426 aa15.12■□□□□ 0.01
SMC1A-204ENST00000463684 PPP1R26Q5T8A7 1209 aaPredicted RBP15.12■□□□□ 0.01
SMC1A-204ENST00000463684 ZNF776Q68DI1 518 aaPredicted RBP15.12■□□□□ 0.01
SMC1A-204ENST00000463684 GPR155Q7Z3F1 870 aa15.12■□□□□ 0.01
SMC1A-204ENST00000463684 FAM217AQ8IXS0 508 aa15.12■□□□□ 0.01
SMC1A-204ENST00000463684 AHI1Q8N157 1196 aa15.12■□□□□ 0.01
SMC1A-204ENST00000463684 ZNF843Q8N446 348 aa15.12■□□□□ 0.01
SMC1A-204ENST00000463684 LINC00301Q8NCQ3 95 aa15.12■□□□□ 0.01
SMC1A-204ENST00000463684 TMC2Q8TDI7 906 aa15.12■□□□□ 0.01
SMC1A-204ENST00000463684 TMA16Q96EY4 203 aaKnown RBP15.12■□□□□ 0.01
SMC1A-204ENST00000463684 ABCB8Q9NUT2 735 aa15.12■□□□□ 0.01
SMC1A-204ENST00000463684 DMAC2Q9NW81 257 aa15.12■□□□□ 0.01
SMC1A-204ENST00000463684 SCML1Q9UN30 329 aa15.12■□□□□ 0.01
SMC1A-204ENST00000463684 HELZ2Q9BYK8 2649 aaKnown RBP15.12■□□□□ 0.01
SMC1A-204ENST00000463684 KALRNO60229 2985 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 ASXL3Q9C0F0 2248 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.11■□□□□ 0.01
SMC1A-204ENST00000463684 TEX51A0A1B0GUA7 166 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 A0A1W2PPC4 97 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 YKT6O15498 198 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 PPP6R2O75170 966 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 DLDP09622 509 aaKnown RBP15.11■□□□□ 0.01
SMC1A-204ENST00000463684 HOXD9P28356 352 aaPredicted RBP15.11■□□□□ 0.01
SMC1A-204ENST00000463684 CASP1P29466 404 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 CLDN6P56747 220 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 SLC8A3P57103 927 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 CUL4AQ13619 759 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 HES3Q5TGS1 186 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 USP30Q70CQ3 517 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 SLC9A9Q8IVB4 645 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 EID2Q8N6I1 236 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 FGF11Q92914 225 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 HEXIM2Q96MH2 286 aaKnown RBP15.11■□□□□ 0.01
SMC1A-204ENST00000463684 ORAI3Q9BRQ5 295 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 UBXN6Q9BZV1 441 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 AASDHPPTQ9NRN7 309 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 OLA1Q9NTK5 396 aaKnown RBP15.11■□□□□ 0.01
SMC1A-204ENST00000463684 GGA2Q9UJY4 613 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 FRMD4BQ9Y2L6 1034 aa15.11■□□□□ 0.01
SMC1A-204ENST00000463684 CBX4O00257 560 aa15.1■□□□□ 0.01
SMC1A-204ENST00000463684 POLR2DO15514 142 aaKnown RBP15.1■□□□□ 0.01
SMC1A-204ENST00000463684 RNASEH1O60930 286 aaKnown RBP15.1■□□□□ 0.01
SMC1A-204ENST00000463684 IGHV4-34P06331 123 aa15.1■□□□□ 0.01
SMC1A-204ENST00000463684 PABPC1P11940 636 aaKnown RBP15.1■□□□□ 0.01
SMC1A-204ENST00000463684 POLR2EP19388 210 aaKnown RBP15.1■□□□□ 0.01
SMC1A-204ENST00000463684 ARRB1P49407 418 aaPredicted RBP15.1■□□□□ 0.01
SMC1A-204ENST00000463684 TRIP4Q15650 581 aaPredicted RBP15.1■□□□□ 0.01
SMC1A-204ENST00000463684 MBLAC2Q68D91 279 aa15.1■□□□□ 0.01
SMC1A-204ENST00000463684 ADIPOR2Q86V24 386 aa15.1■□□□□ 0.01
SMC1A-204ENST00000463684 CCDC150Q8NCX0 1101 aa15.1■□□□□ 0.01
SMC1A-204ENST00000463684 SNIP1Q8TAD8 396 aaKnown RBP15.1■□□□□ 0.01
SMC1A-204ENST00000463684 SAP25Q8TEE9 199 aa15.1■□□□□ 0.01
SMC1A-204ENST00000463684 TMEM174Q8WUU8 243 aa15.1■□□□□ 0.01
SMC1A-204ENST00000463684 SLC6A18Q96N87 628 aa15.1■□□□□ 0.01
SMC1A-204ENST00000463684 BACH2Q9BYV9 841 aa15.1■□□□□ 0.01
SMC1A-204ENST00000463684 GDF3Q9NR23 364 aa15.1■□□□□ 0.01
SMC1A-204ENST00000463684 FBXL12Q9NXK8 326 aa15.1■□□□□ 0.01
SMC1A-204ENST00000463684 LRRC72A6NJI9 287 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 CUTAO60888 179 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 SLFN14P0C7P3 912 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 CD38P28907 300 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 ACTN2P35609 894 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 AFMP43652 599 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 ACADVLP49748 655 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 GALCP54803 685 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 ST8SIA6P61647 398 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 CFHR1Q03591 330 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 CUL4BQ13620 913 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 ZNF394Q53GI3 561 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 ADGRF1Q5T601 910 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 CEP135Q66GS9 1140 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 FBXL19Q6PCT2 694 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 KIAA0907Q7Z7F0 614 aaPredicted RBP15.09■□□□□ 0.01
SMC1A-204ENST00000463684 FMNL3Q8IVF7 1028 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.09■□□□□ 0.01
SMC1A-204ENST00000463684 RNF139Q8WU17 664 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 TMEM176AQ96HP8 235 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 NIF3L1Q9GZT8 377 aa15.09■□□□□ 0.01
SMC1A-204ENST00000463684 RSPH9Q9H1X1 276 aaPredicted RBP15.09■□□□□ 0.01
SMC1A-204ENST00000463684 PABPC3Q9H361 631 aaKnown RBP15.09■□□□□ 0.01
SMC1A-204ENST00000463684 APOBEC3GQ9HC16 384 aaKnown RBP15.09■□□□□ 0.01
SMC1A-204ENST00000463684 HBS1LQ9Y450 684 aaKnown RBP15.09■□□□□ 0.01
SMC1A-204ENST00000463684 GOLGA4Q13439 2230 aaKnown RBP15.09■□□□□ 0.01
SMC1A-204ENST00000463684 J3QKU1 62 aa15.08■□□□□ 0
SMC1A-204ENST00000463684 PDXKO00764 312 aa15.08■□□□□ 0
SMC1A-204ENST00000463684 ZBED1O96006 694 aa15.08■□□□□ 0
SMC1A-204ENST00000463684 NR3C1P04150 777 aa15.08■□□□□ 0
SMC1A-204ENST00000463684 VAMP7P51809 220 aa15.08■□□□□ 0
SMC1A-204ENST00000463684 TKTL1P51854 596 aa15.08■□□□□ 0
SMC1A-204ENST00000463684 CXADRP78310 365 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms