RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 CYB5D1Q6P9G0 228 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 DENND5BQ6ZUT9 1274 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 SLC30A5Q8TAD4 765 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 MXRA8Q9BRK3 442 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 PHF20Q9BVI0 1012 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 MTMR4Q9NYA4 1195 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 PRKAG3Q9UGI9 489 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 PPP2R3BQ9Y5P8 575 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 A0A087X0T9 212 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 BCLAF3A2AJT9 711 aaKnown RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 MED24O75448 989 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 RCVRNP35243 200 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 BTKQ06187 659 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 SMAD1Q15797 465 aaKnown RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 Q4G0T1 1027 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 GNASQ5JWF2 1037 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 PAPD7Q5XG87 772 aaKnown RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 LIN54Q6MZP7 749 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 SCUBE1Q8IWY4 988 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 SIX5Q8N196 739 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 Q96MT0 163 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 MLPHQ9BV36 600 aaPredicted RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 MTMR12Q9C0I1 747 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 MROH8Q9H579 483 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 TRIM49D1C9J1S8 452 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 SUPT7LO94864 414 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 MFN2O95140 757 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 PRDX5P30044 214 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 PTPN21Q16825 1174 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 SBK1Q52WX2 424 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 TYW3Q6IPR3 259 aaKnown RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 ADSSL1Q8N142 457 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 MED8Q96G25 268 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 NMRAL1Q9HBL8 299 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 FAM20BO75063 409 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 LDOC1O95751 146 aaPredicted RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 HSMCR30P0CW71 290 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 RALGDSQ12967 914 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 LMBRD2Q68DH5 695 aaPredicted RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 THOC7Q6I9Y2 204 aaKnown RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 METTL3Q86U44 580 aaKnown RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 TDRD5Q8NAT2 981 aaKnown RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 CSGALNACT1Q8TDX6 532 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 MS4A14Q96JA4 679 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 TRPC4Q9UBN4 977 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 RBP3P10745 1247 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 OGNP20774 298 aaKnown RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 PAX7P23759 505 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 NAMPTP43490 491 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 VAC14Q08AM6 782 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 TUBA3CQ13748 450 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 B3GALNT2Q8NCR0 500 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 NKX2-3Q8TAU0 364 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 CYP3A43Q9HB55 503 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 SLC40A1Q9NP59 571 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 ZCCHC17Q9NP64 241 aaKnown RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 KLHL1Q9NR64 748 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 INTS7Q9NVH2 962 aaKnown RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 RUVBL2Q9Y230 463 aaKnown RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 V9GYQ6 96 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 PRRC2BQ5JSZ5 2229 aaKnown RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 KIF1AQ12756 1690 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 KPNA5O15131 536 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 DGKIO75912 1065 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 TSPAN19P0C672 248 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 VDRP11473 427 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 NMT1P30419 496 aaKnown RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 AP1S2P56377 157 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 PTGISQ16647 500 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 KCNT1Q5JUK3 1230 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 MROH9Q5TGP6 573 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 MZT2BQ6NZ67 158 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 UBE2Q1Q7Z7E8 422 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 FAM81AQ8TBF8 368 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 ACTRT2Q8TDY3 377 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 PNMA8BQ9ULN7 279 aaPredicted RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 FAM50BQ9Y247 325 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 CPS1P31327 1500 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 RBAK-RBAKDNI3L0D1 243 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 M0QYT0 321 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 NR5A2O00482 541 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 NMT2O60551 498 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 PMPCBO75439 489 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 IGSF6O95976 241 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 CCNA2P20248 432 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 DDX39BQ13838 428 aaKnown RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 DGUOKQ16854 277 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 RABL6Q3YEC7 729 aaPredicted RBP9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 RETSATQ6NUM9 610 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 CHPFQ8IZ52 775 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 DAGLBQ8NCG7 672 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 MYCBPAPQ8TBZ2 947 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 POLR1BQ9H9Y6 1135 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 LRRC4BQ9NT99 713 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 EMC3Q9P0I2 261 aa9.09□□□□□ -0.95
SHROOM4-203ENST00000460112 UBE2QL1A1L167 161 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 RRM1P23921 792 aa9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 COILP38432 576 aaPredicted RBP9.08□□□□□ -0.96
SHROOM4-203ENST00000460112 GPR15P49685 360 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms