RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 ZNF394Q53GI3 561 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 FOXD4L5Q5VV16 416 aaPredicted RBP12.43□□□□□ -0.42
TNXB-202ENST00000442721 ATL3Q6DD88 541 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 RSRC2Q7L4I2 434 aaKnown RBP12.43□□□□□ -0.42
TNXB-202ENST00000442721 ADIPOR2Q86V24 386 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 SCUBE3Q8IX30 993 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 ZC3H3Q8IXZ2 948 aaKnown RBP12.43□□□□□ -0.42
TNXB-202ENST00000442721 CYB5D2Q8WUJ1 264 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 FOXD4L4Q8WXT5 416 aaPredicted RBP12.43□□□□□ -0.42
TNXB-202ENST00000442721 SNX19Q92543 992 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 IGSF8Q969P0 613 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 BIRC7Q96CA5 298 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 TMEM176AQ96HP8 235 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 HEXIM2Q96MH2 286 aaKnown RBP12.43□□□□□ -0.42
TNXB-202ENST00000442721 ARID3AQ99856 593 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 ORAI3Q9BRQ5 295 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 ANKRD6Q9Y2G4 727 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 HBS1LQ9Y450 684 aaKnown RBP12.43□□□□□ -0.42
TNXB-202ENST00000442721 TP53BP1Q12888 1972 aaPredicted RBP12.42□□□□□ -0.42
TNXB-202ENST00000442721 SEMA4FO95754 770 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 LATS1O95835 1130 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 ZBED1O96006 694 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 F13A1P00488 732 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 CD27P26842 260 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 GTF2H1P32780 548 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 CTSKP43235 329 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 CCT8P50990 548 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 TKTL1P51854 596 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 ZNF445P59923 1031 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 ARID5AQ03989 594 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 CYP4F3Q08477 520 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 TEAD4Q15561 434 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 FOXD4L6Q3SYB3 417 aaPredicted RBP12.42□□□□□ -0.42
TNXB-202ENST00000442721 FNDC3BQ53EP0 1204 aaKnown RBP12.42□□□□□ -0.42
TNXB-202ENST00000442721 KCNT1Q5JUK3 1230 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 LAYNQ6UX15 382 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 FOXD4L3Q6VB84 417 aaPredicted RBP12.42□□□□□ -0.42
TNXB-202ENST00000442721 CHST9Q7L1S5 443 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 FMNL3Q8IVF7 1028 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 FAM186BQ8IYM0 893 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 TTC39CQ8N584 583 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 ZNF366Q8N895 744 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 ANKRD52Q8NB46 1076 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 CCDC150Q8NCX0 1101 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 NDRG1Q92597 394 aaKnown RBP12.42□□□□□ -0.42
TNXB-202ENST00000442721 SEMA4DQ92854 862 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 LRIG1Q96JA1 1093 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 ULBP1Q9BZM6 244 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 BTBD1Q9H0C5 482 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 PRSS16Q9NQE7 514 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 CISHQ9NSE2 258 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 OLA1Q9NTK5 396 aaKnown RBP12.42□□□□□ -0.42
TNXB-202ENST00000442721 GGA2Q9UJY4 613 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 RCOR1Q9UKL0 485 aa12.42□□□□□ -0.42
TNXB-202ENST00000442721 GCN1Q92616 2671 aaKnown RBP12.42□□□□□ -0.42
TNXB-202ENST00000442721 COL5A1P20908 1838 aaPredicted RBP12.41□□□□□ -0.42
TNXB-202ENST00000442721 GOLGA8CPA6NN73 597 aa12.41□□□□□ -0.42
TNXB-202ENST00000442721 E9PAM4 449 aa12.41□□□□□ -0.42
TNXB-202ENST00000442721 H0Y8X5 98 aa12.41□□□□□ -0.42
TNXB-202ENST00000442721 TULP2O00295 520 aa12.41□□□□□ -0.42
TNXB-202ENST00000442721 KCNK3O14649 394 aa12.41□□□□□ -0.42
TNXB-202ENST00000442721 RHOBTB3O94955 611 aa12.41□□□□□ -0.42
TNXB-202ENST00000442721 DLDP09622 509 aaKnown RBP12.41□□□□□ -0.42
TNXB-202ENST00000442721 PABPC1P11940 636 aaKnown RBP12.41□□□□□ -0.42
TNXB-202ENST00000442721 KRT13P13646 458 aa12.41□□□□□ -0.42
TNXB-202ENST00000442721 PSMC2P35998 433 aaKnown RBP12.41□□□□□ -0.42
TNXB-202ENST00000442721 HARS2P49590 506 aaKnown RBP12.41□□□□□ -0.42
TNXB-202ENST00000442721 PKP1Q13835 747 aa12.41□□□□□ -0.42
TNXB-202ENST00000442721 KRT39Q6A163 491 aa12.41□□□□□ -0.42
TNXB-202ENST00000442721 AHI1Q8N157 1196 aa12.41□□□□□ -0.42
TNXB-202ENST00000442721 PDCD7Q8N8D1 485 aaKnown RBP12.41□□□□□ -0.42
TNXB-202ENST00000442721 SGK2Q9HBY8 427 aa12.41□□□□□ -0.42
TNXB-202ENST00000442721 ABCB8Q9NUT2 735 aa12.41□□□□□ -0.42
TNXB-202ENST00000442721 USP25Q9UHP3 1055 aa12.41□□□□□ -0.42
TNXB-202ENST00000442721 PLA2G4CQ9UP65 541 aa12.41□□□□□ -0.42
TNXB-202ENST00000442721 HPSEQ9Y251 543 aa12.41□□□□□ -0.42
TNXB-202ENST00000442721 BPTFQ12830 3046 aa12.4□□□□□ -0.42
TNXB-202ENST00000442721 PLXNA2O75051 1894 aa12.4□□□□□ -0.42
TNXB-202ENST00000442721 FAM149AA5PLN7 773 aa12.4□□□□□ -0.42
TNXB-202ENST00000442721 C10orf142B7Z368 130 aa12.4□□□□□ -0.42
TNXB-202ENST00000442721 XPO1O14980 1071 aaKnown RBP12.4□□□□□ -0.42
TNXB-202ENST00000442721 DFNA5O60443 496 aa12.4□□□□□ -0.42
TNXB-202ENST00000442721 DNTTP04053 509 aa12.4□□□□□ -0.42
TNXB-202ENST00000442721 PFKFB1P16118 471 aa12.4□□□□□ -0.42
TNXB-202ENST00000442721 SGSHP51688 502 aa12.4□□□□□ -0.42
TNXB-202ENST00000442721 BCAT1P54687 386 aa12.4□□□□□ -0.42
TNXB-202ENST00000442721 GOLGA7BQ2TAP0 167 aa12.4□□□□□ -0.42
TNXB-202ENST00000442721 ZCWPW2Q504Y3 356 aa12.4□□□□□ -0.42
TNXB-202ENST00000442721 MPP7Q5T2T1 576 aa12.4□□□□□ -0.42
TNXB-202ENST00000442721 ADGRF1Q5T601 910 aa12.4□□□□□ -0.42
TNXB-202ENST00000442721 MBLAC2Q68D91 279 aa12.4□□□□□ -0.42
TNXB-202ENST00000442721 ZNF776Q68DI1 518 aaPredicted RBP12.4□□□□□ -0.42
TNXB-202ENST00000442721 WFDC5Q8TCV5 224 aa12.4□□□□□ -0.42
TNXB-202ENST00000442721 GOLGA1Q92805 767 aa12.4□□□□□ -0.42
TNXB-202ENST00000442721 TMA16Q96EY4 203 aaKnown RBP12.4□□□□□ -0.42
TNXB-202ENST00000442721 LMLNQ96KR4 655 aa12.4□□□□□ -0.42
TNXB-202ENST00000442721 IRX2Q9BZI1 471 aaPredicted RBP12.4□□□□□ -0.42
TNXB-202ENST00000442721 RSPH9Q9H1X1 276 aaPredicted RBP12.4□□□□□ -0.42
TNXB-202ENST00000442721 MMRN2Q9H8L6 949 aa12.4□□□□□ -0.42
TNXB-202ENST00000442721 SFMBT1Q9UHJ3 866 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms