RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 LGMNQ99538 433 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 ZNF518BQ9C0D4 1074 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 A0A1B0GUL6 1792 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 ANKRD12Q6UB98 2062 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 A0A0B4J269 797 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 C17orf102A2RUQ5 167 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 C5orf58C9J3I9 102 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 TIMM44O43615 452 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 CLASP2O75122 1294 aaKnown RBP10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 CLPTM1O96005 669 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 YBX3P16989 372 aaKnown RBP eCLIP10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 MUTP22033 750 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 GLRA2P23416 452 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 PBLDP30039 288 aaPredicted RBP10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 DSG3P32926 999 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 TDRD10Q5VZ19 366 aaKnown RBP10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 MILR1Q7Z6M3 343 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 OR52K1Q8NGK4 314 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 SYT15Q9BQS2 421 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 B3GNT5Q9BYG0 378 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 GID8Q9NWU2 228 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 TAGLN3Q9UI15 199 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 SH3BP1Q9Y3L3 701 aa10.87□□□□□ -0.67
SEMA4D-208ENST00000422704 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 HEATR9A2RTY3 570 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 RRN3P2A6NIE6 340 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 ACKR2O00590 384 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 MTSS1O43312 755 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 ZNF682O95780 498 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 CREB1P16220 341 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 UBA1P22314 1058 aaKnown RBP10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 PRKCIP41743 596 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 ALDH7A1P49419 539 aaKnown RBP10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 ZNF177Q13360 481 aaPredicted RBP10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 NR6A1Q15406 480 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 DEFB128Q7Z7B8 93 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 VSIG10LQ86VR7 867 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 CPNE8Q86YQ8 564 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 BRSK2Q8IWQ3 736 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 UNC45BQ8IWX7 931 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 DCP1BQ8IZD4 617 aaKnown RBP10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 KCTD17Q8N5Z5 321 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 C4orf32Q8N8J7 132 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 OR9Q1Q8NGQ5 310 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 OXNAD1Q96HP4 312 aaPredicted RBP10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 ZNF333Q96JL9 665 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 TBC1D10AQ9BXI6 508 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 LAMA4Q16363 1823 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 DNAJC13O75165 2243 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 MOXD2PA6NHM9 499 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 EVPLLA8MZ36 301 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 F8W8V4 182 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 SLC26A4O43511 780 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 PLA2G6O60733 806 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 RECQL4O94761 1208 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 ACADSP16219 412 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 KDELR1P24390 212 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 SLC16A1P53985 500 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 HDAC4P56524 1084 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 ELF3P78545 371 aaPredicted RBP10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 CDC16Q13042 620 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 DEPDC1Q5TB30 811 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 C9orf131Q5VYM1 1079 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 IQCKQ8N0W5 287 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 CATSPER1Q8NEC5 780 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 CDCA5Q96FF9 252 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 PCDHB18PQ96TA0 734 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 TRIM62Q9BVG3 475 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 ULBP1Q9BZM6 244 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 CACNA2D2Q9NY47 1150 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 MAGEA13PA6NCF6 341 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 PTGES3LE9PB15 166 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 SMAPO00193 183 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 DAB1O75553 588 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 SOAT2O75908 522 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 PSMC3P17980 439 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 ALDH1A3P47895 512 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 SERPINB8P50452 374 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 KRT72Q14CN4 511 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 GRIK4Q16099 956 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 KCTD21Q4G0X4 260 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 CTXN3Q4LDR2 81 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 PGBD3Q8N328 593 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 CARNMT1Q8N4J0 409 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 SPATA20Q8TB22 786 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 DDI1Q8WTU0 396 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 HES6Q96HZ4 224 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 NEUROG2Q9H2A3 272 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 VPS28Q9UK41 221 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 LSM7Q9UK45 103 aaKnown RBP10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 CASZ1Q86V15 1759 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 IRF6O14896 467 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 TRIM13O60858 407 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 LTFP02788 710 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 NELFEP18615 380 aaKnown RBP10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 PNPLA4P41247 253 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 TUBP50607 506 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 BST2Q10589 180 aaKnown RBP10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 TRAF2Q12933 501 aa10.86□□□□□ -0.67
SEMA4D-208ENST00000422704 MARC1Q5VT66 337 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms