RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 OLFM3Q96PB7 478 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 SIK2Q9H0K1 926 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 PABPC3Q9H361 631 aaKnown RBP13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 SEMA4AQ9H3S1 761 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 FNIP2Q9P278 1114 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 MAGED2Q9UNF1 606 aaPredicted RBP13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 H0YGN5 161 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 OPA1O60313 960 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 SLC2A3P11169 496 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 DNAJB2P25686 324 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 EPHB2P29323 1055 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 OAS2P29728 719 aaKnown RBP13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 ACTN2P35609 894 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 TBX4P57082 545 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 CBX1P83916 185 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 EFEMP1Q12805 493 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 ZCCHC9Q8N567 271 aaKnown RBP13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 LRRN4Q8WUT4 740 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 TFB1MQ8WVM0 346 aaKnown RBP13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 HERVK_113Q902F9 699 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 CLP1Q92989 425 aaKnown RBP13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 PWWP2AQ96N64 755 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 QKIQ96PU8 341 aaKnown RBP eCLIP13.73□□□□□ -0.212e-7■■■■■ 37
CEACAM1-206ENST00000403136 RUFY1Q96T51 708 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 RAD9AQ99638 391 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 PAK5Q9P286 719 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 FARP1Q9Y4F1 1045 aaPredicted RBP13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 NFS1Q9Y697 457 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 MFSD11O43934 449 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 CSH1P0DML2 217 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 CSH2P0DML3 217 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 ELF1P32519 619 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 ALDH1A3P47895 512 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 MLLT6P55198 1093 aaPredicted RBP13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 PDK1Q15118 436 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 C10orf120Q5SQS8 335 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 CEP128Q6ZU80 1094 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 TRMT10CQ7L0Y3 403 aaKnown RBP13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 HERC6Q8IVU3 1022 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 PPIL6Q8IXY8 311 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 ZNF276Q8N554 614 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 CCDC33Q8N5R6 958 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 PHOSPHO2Q8TCD6 241 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 CPT1BQ92523 772 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 FCRL2Q96LA5 508 aaPredicted RBP13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 C1orf74Q96LT6 269 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 SH3GL2Q99962 352 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 EPB41L4BQ9H329 900 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 RXFP1Q9HBX9 757 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 MARCH2Q9P0N8 246 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 MAFFQ9ULX9 164 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 SHOC2Q9UQ13 582 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 SSX2IPQ9Y2D8 614 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 RAD54BQ9Y620 910 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 SLC4A7Q9Y6M7 1214 aa13.72□□□□□ -0.21
CEACAM1-206ENST00000403136 C5orf60A6NFR6 353 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 SMAPO00193 183 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 TEX28O15482 410 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 GCATO75600 419 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 SRGAP2BP0DMP2 458 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 CTSAP10619 480 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 HMGA1P17096 107 aaKnown RBP13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 HTR7P34969 479 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 TRIP4Q15650 581 aaPredicted RBP13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 SNX30Q5VWJ9 437 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 C4orf22Q6V702 233 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 HOOK3Q86VS8 718 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 NAT8LQ8N9F0 302 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 KLHL23Q8NBE8 558 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 PDZD8Q8NEN9 1154 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 HTR3CQ8WXA8 447 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 OVCA2Q8WZ82 227 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 MYRFLQ96LU7 910 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 LGMNQ99538 433 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 ZBP1Q9H171 429 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 PRDM12Q9H4Q4 367 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 SLC12A6Q9UHW9 1150 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 YIPF1Q9Y548 306 aa13.71□□□□□ -0.21
CEACAM1-206ENST00000403136 NCAM2O15394 837 aa13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 TLR5O60602 858 aa13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 MOCS2O96007 188 aaPredicted RBP13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 SYN1P17600 705 aa13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 NRG1Q02297 640 aaPredicted RBP13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 CREMQ03060 361 aa13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 SLC29A2Q14542 456 aa13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 HEATR6Q6AI08 1181 aaKnown RBP13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 RWDD4Q6NW29 188 aaKnown RBP13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 MIB1Q86YT6 1006 aa13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 RELL1Q8IUW5 271 aa13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 TCEAL8Q8IYN2 117 aa13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 TAB3Q8N5C8 712 aaPredicted RBP13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 GOLGA6L1Q8N7Z2 621 aa13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 NETO2Q8NC67 525 aa13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 OR2W6PQ8NHA6 318 aa13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 SP7Q8TDD2 431 aaPredicted RBP13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 PRCCQ92733 491 aaPredicted RBP13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 ZNF512Q96ME7 567 aaPredicted RBP13.71□□□□□ -0.22
CEACAM1-206ENST00000403136 CDK5RAP1Q96SZ6 601 aaKnown RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms