RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 BPTFQ12830 3046 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 SPDYE16A6NNV3 312 aaPredicted RBP14.16□□□□□ -0.14
COL6A2-203ENST00000397763 NOP56O00567 594 aaKnown RBP14.16□□□□□ -0.14
COL6A2-203ENST00000397763 NDC80O14777 642 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 PPEF2O14830 753 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 KLF11O14901 512 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 SNNO75324 88 aaPredicted RBP14.16□□□□□ -0.14
COL6A2-203ENST00000397763 AMHP03971 560 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 PRKCHP24723 683 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 COPAP53621 1224 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 DNAL1Q4LDG9 190 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 MBLAC2Q68D91 279 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 XRRA1Q6P2D8 792 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 FNIP1Q8TF40 1166 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 SNRNP27Q8WVK2 155 aaKnown RBP14.16□□□□□ -0.14
COL6A2-203ENST00000397763 PPP2R3CQ969Q6 453 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 NIFKQ9BYG3 293 aaKnown RBP14.16□□□□□ -0.14
COL6A2-203ENST00000397763 HES2Q9Y543 173 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 ZNF646O15015 1829 aaPredicted RBP14.16□□□□□ -0.14
COL6A2-203ENST00000397763 LCP1P13796 627 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 VAV1P15498 845 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 TCN1P20061 433 aaPredicted RBP14.16□□□□□ -0.14
COL6A2-203ENST00000397763 RXRBP28702 533 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 IDH3AP50213 366 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 MAP3K10Q02779 954 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 TUBB3Q13509 450 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 PPM1LQ5SGD2 360 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 FKBP1CQ5VVH2 108 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 MICALL2Q8IY33 904 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 NAT14Q8WUY8 206 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 APOL2Q9BQE5 337 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 WDR55Q9H6Y2 383 aaPredicted RBP14.16□□□□□ -0.14
COL6A2-203ENST00000397763 XPNPEP3Q9NQH7 507 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 PPME1Q9Y570 386 aa14.16□□□□□ -0.14
COL6A2-203ENST00000397763 SDC4P31431 198 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 CRHR1P34998 444 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 RABGGTBP53611 331 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 MAP7Q14244 749 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 PDPK2PQ6A1A2 396 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 MAP7D3Q8IWC1 876 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 PLD6Q8N2A8 252 aaKnown RBP14.15□□□□□ -0.14
COL6A2-203ENST00000397763 ARHGAP18Q8N392 663 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 CCNYQ8ND76 341 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.15□□□□□ -0.14
COL6A2-203ENST00000397763 TFB1MQ8WVM0 346 aaKnown RBP14.15□□□□□ -0.14
COL6A2-203ENST00000397763 USP13Q92995 863 aaPredicted RBP14.15□□□□□ -0.14
COL6A2-203ENST00000397763 F8W8V4 182 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 ZBTB14O43829 449 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 PDGFRBP09619 1106 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 COL11A1P12107 1806 aaPredicted RBP14.15□□□□□ -0.14
COL6A2-203ENST00000397763 TYK2P29597 1187 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 GLRA4Q5JXX5 417 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 EFCAB12Q6NXP0 572 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 FBXL19Q6PCT2 694 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 FAM131BQ86XD5 332 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 CCDC185Q8N715 623 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 PIP4K2CQ8TBX8 421 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 NRDE2Q9H7Z3 1164 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 CDH22Q9UJ99 828 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 MGAMO43451 1857 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 GABBR2O75899 941 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 VTNP04004 478 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 PFKMP08237 780 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 GOT1P17174 413 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 ADORA2BP29275 332 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 EFNA5P52803 228 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 PKNOX1P55347 436 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 HDAC4P56524 1084 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 ENPEPQ07075 957 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 TMED1Q13445 227 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 PCLAFQ15004 111 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 TREML2Q5T2D2 321 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 PTAR1Q7Z6K3 402 aaPredicted RBP14.15□□□□□ -0.14
COL6A2-203ENST00000397763 CEP70Q8NHQ1 597 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 MAPK15Q8TD08 544 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 OLFM3Q96PB7 478 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 CHCHD3Q9NX63 227 aaKnown RBP14.15□□□□□ -0.14
COL6A2-203ENST00000397763 ATXN10Q9UBB4 475 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 POMPQ9Y244 141 aa14.15□□□□□ -0.14
COL6A2-203ENST00000397763 EVPLQ92817 2033 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 SOWAHBA6NEL2 793 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 FAM159BA6NKW6 160 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 ZBTB42B2RXF5 422 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 KCNK1O00180 336 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 SPAG6O75602 509 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 FAM200BP0CF97 657 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 CRABP2P29373 138 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 AP3M2P53677 418 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 IRF9Q00978 393 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 TBL3Q12788 808 aaKnown RBP14.14□□□□□ -0.15
COL6A2-203ENST00000397763 SLC9B1Q4ZJI4 515 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 FAM47CQ5HY64 1035 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 TTC30AQ86WT1 665 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 SULF1Q8IWU6 871 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 TRIM42Q8IWZ5 723 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 NME8Q8N427 588 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 ZNF781Q8N8C0 355 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 SEPT1Q8WYJ6 367 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 APPL1Q9UKG1 709 aa14.14□□□□□ -0.15
COL6A2-203ENST00000397763 SNX9Q9Y5X1 595 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms