RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 RGL4Q8IZJ4 473 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 PHF21BQ96EK2 531 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 MRPL48Q96GC5 212 aaKnown RBP10.63□□□□□ -0.71
COL4A6-203ENST00000394872 ZDHHC6Q9H6R6 413 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 IL17RBQ9NRM6 502 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 ADAMTS13Q76LX8 1427 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 WDR27A2RRH5 827 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 SLCO1B7G3V0H7 640 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 YBX3P16989 372 aaKnown RBP eCLIP10.63□□□□□ -0.71
COL4A6-203ENST00000394872 ATP6V1B2P21281 511 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 PPP2R1BP30154 601 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 GRK4P32298 578 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 BNC2Q6ZN30 1099 aaPredicted RBP10.63□□□□□ -0.71
COL4A6-203ENST00000394872 ZNF606Q8WXB4 792 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 DCLK3Q9C098 648 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 RERGLQ9H628 205 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 SYBUQ9NX95 663 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 NR2E3Q9Y5X4 410 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 NCOA3Q9Y6Q9 1424 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 TMEM114B3SHH9 223 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 DSG1Q02413 1049 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 GRTP1Q5TC63 336 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 CES5AQ6NT32 575 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 DEFB106AQ8N104 65 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 ZSWIM2Q8NEG5 633 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 ACTRT1Q8TDG2 376 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 OSCP1Q8WVF1 389 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 SUSD6Q92537 303 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 CDC42EP4Q9H3Q1 356 aaKnown RBP10.63□□□□□ -0.71
COL4A6-203ENST00000394872 KCNQ5Q9NR82 932 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 RGS18Q9NS28 235 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 VPS51Q9UID3 782 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 KLHL20Q9Y2M5 609 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 NDUFS2O75306 463 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 KRT6AP02538 564 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 KRT6BP04259 564 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 CTSEP14091 401 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 KRT6CP48668 564 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 BMPR2Q13873 1038 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 SRLQ86TD4 932 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 KCNMB4Q86W47 210 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 TMEM199Q8N511 208 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 FAM120BQ96EK7 910 aaKnown RBP10.63□□□□□ -0.71
COL4A6-203ENST00000394872 OMDQ99983 421 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 KCTD14Q9BQ13 255 aaPredicted RBP10.63□□□□□ -0.71
COL4A6-203ENST00000394872 PARVBQ9HBI1 364 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 AKAP7Q9P0M2 348 aaPredicted RBP10.63□□□□□ -0.71
COL4A6-203ENST00000394872 UBA2Q9UBT2 640 aaPredicted RBP10.63□□□□□ -0.71
COL4A6-203ENST00000394872 TCRBV5S4A2TA0A5A2 114 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 ATP5BP06576 529 aaKnown RBP10.63□□□□□ -0.71
COL4A6-203ENST00000394872 GSTA3Q16772 222 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 CAPN6Q9Y6Q1 641 aa10.63□□□□□ -0.71
COL4A6-203ENST00000394872 TBC1D3BA6NDS4 549 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 KLHL41O60662 606 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 CABYRO75952 493 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 VHLP40337 213 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 MLH1P40692 756 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 AQP5P55064 265 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 PDPK2PQ6A1A2 396 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 CDK20Q8IZL9 346 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 HTR3CQ8WXA8 447 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 DEPDC7Q96QD5 511 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 TKTL2Q9H0I9 626 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 DDX4Q9NQI0 724 aaKnown RBP10.62□□□□□ -0.71
COL4A6-203ENST00000394872 KLHL28Q9NXS3 571 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 POLG2Q9UHN1 485 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 BAIAP3O94812 1187 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 MGAT1P26572 445 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 NR2C2P49116 596 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 DACT2Q5SW24 774 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 ATAD3BQ5T9A4 648 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 FBXL19Q6PCT2 694 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 ZPBP2Q6X784 338 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 DPY30Q9C005 99 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 PIH1D1Q9NWS0 290 aaKnown RBP10.62□□□□□ -0.71
COL4A6-203ENST00000394872 NWD1Q149M9 1564 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 PIK3CDO00329 1044 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 WBP4O75554 376 aaKnown RBP10.62□□□□□ -0.71
COL4A6-203ENST00000394872 RECQL4O94761 1208 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 BGNP21810 368 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 PEX5P50542 639 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 POLR2LP62875 67 aaKnown RBP10.62□□□□□ -0.71
COL4A6-203ENST00000394872 XRCC4Q13426 336 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 SHROOM1Q2M3G4 852 aaPredicted RBP10.62□□□□□ -0.71
COL4A6-203ENST00000394872 SPANXN3Q5MJ09 141 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 ARMC12Q5T9G4 340 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 CYP20A1Q6UW02 462 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 LUZP2Q86TE4 346 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 DNAAF5Q86Y56 855 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 TMEM86AQ8N2M4 240 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 LZTR1Q8N653 840 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 USP7Q93009 1102 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 GAD1Q99259 594 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 RARGP13631 454 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 CCT8P50990 548 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 IRAK1P51617 712 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 SLC6A3Q01959 620 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 PRAMEF19Q5SWL8 479 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 LLGL2Q6P1M3 1020 aa10.62□□□□□ -0.71
COL4A6-203ENST00000394872 ACTL9Q8TC94 416 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms