RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 ZCCHC9Q8N567 271 aaKnown RBP16.42■□□□□ 0.22
COL2A1-202ENST00000380518 ATG16L2Q8NAA4 619 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 SMARCD1Q96GM5 515 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 VAT1Q99536 393 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 TIMM13Q9Y5L4 95 aaPredicted RBP16.42■□□□□ 0.22
COL2A1-202ENST00000380518 ALDH2P05091 517 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 ACAT1P24752 427 aaKnown RBP16.42■□□□□ 0.22
COL2A1-202ENST00000380518 NAB1Q13506 487 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 KCNK18Q7Z418 384 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 LPCAT1Q8NF37 534 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 NSMCE2Q96MF7 247 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 SERPINB11Q96P15 392 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 MTMR9Q96QG7 549 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 NMRAL1Q9HBL8 299 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 ZMYM2Q9UBW7 1377 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 KCNK1O00180 336 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 CXCL11O14625 94 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 TRDMT1O14717 391 aaKnown RBP16.42■□□□□ 0.22
COL2A1-202ENST00000380518 CNOT3O75175 753 aaKnown RBP16.42■□□□□ 0.22
COL2A1-202ENST00000380518 ZNF135P52742 658 aaPredicted RBP16.42■□□□□ 0.22
COL2A1-202ENST00000380518 VAC14Q08AM6 782 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 TRIP4Q15650 581 aaPredicted RBP16.42■□□□□ 0.22
COL2A1-202ENST00000380518 KCNT2Q6UVM3 1135 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 DEFB106AQ8N104 65 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 FBXO39Q8N4B4 442 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 LRRN4CLQ8ND94 238 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 GLMNQ92990 594 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 DPY30Q9C005 99 aa16.42■□□□□ 0.22
COL2A1-202ENST00000380518 DIP2CQ9Y2E4 1556 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 AK9Q5TCS8 1911 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 PDE5AO76074 875 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 SLC34A1Q06495 639 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 MAD2L1Q13257 205 aaPredicted RBP16.41■□□□□ 0.22
COL2A1-202ENST00000380518 SLC44A4Q53GD3 710 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 ZNF470Q6ECI4 717 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 CCDC103Q8IW40 242 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 SCUBE3Q8IX30 993 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 OSCP1Q8WVF1 389 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 TAS2R13Q9NYV9 303 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 ANKRD6Q9Y2G4 727 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 RNASEH1O60930 286 aaKnown RBP16.41■□□□□ 0.22
COL2A1-202ENST00000380518 SLC2A4P14672 509 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 AXLP30530 894 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 CDH8P55286 799 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 TGFB2P61812 414 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 ANKS6Q68DC2 871 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 ZNF75CPQ92670 426 aaPredicted RBP16.41■□□□□ 0.22
COL2A1-202ENST00000380518 DMAP1Q9NPF5 467 aaPredicted RBP16.41■□□□□ 0.22
COL2A1-202ENST00000380518 RGS18Q9NS28 235 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 ATP9AO75110 1047 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 VAPBO95292 243 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 ALADP13716 330 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 HOXB8P17481 243 aaPredicted RBP16.41■□□□□ 0.22
COL2A1-202ENST00000380518 TUBP50607 506 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 ALDH5A1P51649 535 aaPredicted RBP16.41■□□□□ 0.22
COL2A1-202ENST00000380518 FAM98BQ52LJ0 330 aaKnown RBP16.41■□□□□ 0.22
COL2A1-202ENST00000380518 ZNF410Q86VK4 478 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 PRRG3Q9BZD7 231 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 CHST7Q9NS84 486 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 FAM237AA0A1B0GTK4 181 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 PRR23AA6NEV1 266 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 LACTBL1A8MY62 500 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 DLGAP3O95886 979 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 FAM58BPP0C7Q3 252 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 FAAP100Q0VG06 881 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 NCF4Q15080 339 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 RIPOR1Q6ZS17 1223 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 CHMP1BQ7LBR1 199 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 LUZP2Q86TE4 346 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 NRDE2Q9H7Z3 1164 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 VTA1Q9NP79 307 aa16.41■□□□□ 0.22
COL2A1-202ENST00000380518 DDX4Q9NQI0 724 aaKnown RBP16.41■□□□□ 0.22
COL2A1-202ENST00000380518 TMEM150BA6NC51 233 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 CYP1A1P04798 512 aaPredicted RBP16.4■□□□□ 0.22
COL2A1-202ENST00000380518 SNX30Q5VWJ9 437 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 TFAP2DQ7Z6R9 452 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 SLC2A14Q8TDB8 520 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 DNAJB3Q8WWF6 145 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 CYP39A1Q9NYL5 469 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 SYNPO2Q9UMS6 1093 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 NDUFAF1Q9Y375 327 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 KRT75O95678 551 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 ZNF7P17097 686 aaPredicted RBP16.4■□□□□ 0.22
COL2A1-202ENST00000380518 AKAP5P24588 427 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 KRT20P35900 424 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 CENPAP49450 140 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 KYAT3Q6YP21 454 aaKnown RBP16.4■□□□□ 0.22
COL2A1-202ENST00000380518 EPS8L1Q8TE68 723 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 MTERF3Q96E29 417 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 TMEM79Q9BSE2 394 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 BDH2Q9BUT1 245 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 UNKQ9C0B0 810 aaKnown RBP16.4■□□□□ 0.22
COL2A1-202ENST00000380518 CAPN10Q9HC96 672 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 GBA2Q9HCG7 927 aaPredicted RBP16.4■□□□□ 0.22
COL2A1-202ENST00000380518 SAR1AQ9NR31 198 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 DIP2BQ9P265 1576 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 SATB2Q9UPW6 733 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 STARD13Q9Y3M8 1113 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 TNS2Q63HR2 1409 aa16.4■□□□□ 0.22
COL2A1-202ENST00000380518 RAD51BO15315 384 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms