RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 DLDP09622 509 aaKnown RBP15.36■□□□□ 0.05
HDAC6-204ENST00000376643 PABPC1P11940 636 aaKnown RBP15.36■□□□□ 0.05
HDAC6-204ENST00000376643 LCP1P13796 627 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 POLR2EP19388 210 aaKnown RBP15.36■□□□□ 0.05
HDAC6-204ENST00000376643 ACADSBP45954 432 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 ST8SIA6P61647 398 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 LRMPQ12912 555 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 GRIK2Q13002 908 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 CAMK2GQ13555 558 aaPredicted RBP15.36■□□□□ 0.05
HDAC6-204ENST00000376643 TEAD4Q15561 434 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 MEA1Q16626 185 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 PKDCCQ504Y2 493 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 DCAF12L1Q5VU92 463 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 SMYD5Q6GMV2 418 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 CHST9Q7L1S5 443 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 BHLHA9Q7RTU4 235 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 UBR7Q8N806 425 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 HJURPQ8NCD3 748 aaPredicted RBP15.36■□□□□ 0.05
HDAC6-204ENST00000376643 ENGASEQ8NFI3 743 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 SLC35F5Q8WV83 523 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 MIR1-1HGQ9H1L0 117 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 SLC6A17Q9H1V8 727 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 SFMBT1Q9UHJ3 866 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 GGA2Q9UJY4 613 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 WASF3Q9UPY6 502 aa15.36■□□□□ 0.05
HDAC6-204ENST00000376643 ASCC3Q8N3C0 2202 aaKnown RBP15.36■□□□□ 0.05
HDAC6-204ENST00000376643 TRIM49BA6NDI0 452 aa15.35■□□□□ 0.05
HDAC6-204ENST00000376643 TULP2O00295 520 aa15.35■□□□□ 0.05
HDAC6-204ENST00000376643 RNASEH1O60930 286 aaKnown RBP15.35■□□□□ 0.05
HDAC6-204ENST00000376643 DNTTP04053 509 aa15.35■□□□□ 0.05
HDAC6-204ENST00000376643 ASLP04424 464 aa15.35■□□□□ 0.05
HDAC6-204ENST00000376643 C7P10643 843 aa15.35■□□□□ 0.05
HDAC6-204ENST00000376643 PRKCHP24723 683 aa15.35■□□□□ 0.05
HDAC6-204ENST00000376643 HLA-FP30511 346 aa15.35■□□□□ 0.05
HDAC6-204ENST00000376643 MATKP42679 507 aa15.35■□□□□ 0.05
HDAC6-204ENST00000376643 AFF3P51826 1226 aaKnown RBP15.35■□□□□ 0.05
HDAC6-204ENST00000376643 COPAP53621 1224 aa15.35■□□□□ 0.05
HDAC6-204ENST00000376643 PMS1P54277 932 aaKnown RBP15.35■□□□□ 0.05
HDAC6-204ENST00000376643 TBX4P57082 545 aa15.35■□□□□ 0.05
HDAC6-204ENST00000376643 SUZ12Q15022 739 aaKnown RBP15.35■□□□□ 0.05
HDAC6-204ENST00000376643 BEND5Q7L4P6 421 aa15.35■□□□□ 0.05
HDAC6-204ENST00000376643 ZCCHC9Q8N567 271 aaKnown RBP15.35■□□□□ 0.05
HDAC6-204ENST00000376643 RBBP8NLQ8NC74 664 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-204ENST00000376643 BTBD1Q9H0C5 482 aa15.35■□□□□ 0.05
HDAC6-204ENST00000376643 TMEM245Q9H330 911 aa15.35■□□□□ 0.05
HDAC6-204ENST00000376643 ABCB8Q9NUT2 735 aa15.35■□□□□ 0.05
HDAC6-204ENST00000376643 TPX2Q9ULW0 747 aaKnown RBP15.35■□□□□ 0.05
HDAC6-204ENST00000376643 APOBEC2Q9Y235 224 aaKnown RBP15.35■□□□□ 0.05
HDAC6-204ENST00000376643 CEP295Q9C0D2 2601 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 SPAARA0A1B0GVQ0 90 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 C1QTNF9BB2RNN3 333 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 ACSL4O60488 711 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 TSPAN3O60637 253 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 MOCS3O95396 460 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 IGLV3-27P01718 113 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 C1QTNF9P0C862 333 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 CD59P13987 128 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 MTA1Q13330 715 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 TRIP6Q15654 476 aaKnown RBP15.34■□□□□ 0.05
HDAC6-204ENST00000376643 MBLAC2Q68D91 279 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 ENOSF1Q7L5Y1 443 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 KIAA0907Q7Z7F0 614 aaPredicted RBP15.34■□□□□ 0.05
HDAC6-204ENST00000376643 NAXDQ8IW45 347 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 MFN1Q8IWA4 741 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 KDM1BQ8NB78 822 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 SKA1Q96BD8 255 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 ERLEC1Q96DZ1 483 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 SGK2Q9HBY8 427 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 OSGEPQ9NPF4 335 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 ZMIZ1Q9ULJ6 1067 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 NCKAP1Q9Y2A7 1128 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 TLR6Q9Y2C9 796 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 PCDHGB2Q9Y5G2 931 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 CEP192Q8TEP8 1941 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 LAMA1P25391 3075 aa15.34■□□□□ 0.05
HDAC6-204ENST00000376643 PCDH15Q96QU1 1955 aa15.33■□□□□ 0.05
HDAC6-204ENST00000376643 CAPN9O14815 690 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 MSI1O43347 362 aaKnown RBP15.33■□□□□ 0.04
HDAC6-204ENST00000376643 TBL1XO60907 577 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 GJB3O75712 270 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 APOEP02649 317 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 RGS7P49802 495 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 CDH18Q13634 790 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 INAVAQ3KP66 663 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 PIK3R6Q5UE93 754 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 ZNF776Q68DI1 518 aaPredicted RBP15.33■□□□□ 0.04
HDAC6-204ENST00000376643 PMF1Q6P1K2 205 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 STK32AQ8WU08 396 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 NELFBQ8WX92 580 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 SORCS1Q8WY21 1168 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 SNX19Q92543 992 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 NDRG1Q92597 394 aaKnown RBP15.33■□□□□ 0.04
HDAC6-204ENST00000376643 GATA6Q92908 595 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 FAM149B1Q96BN6 582 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 MED15Q96RN5 788 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 CDC6Q99741 560 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 FSCN3Q9NQT6 498 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 SLC12A6Q9UHW9 1150 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 MAN1B1Q9UKM7 699 aa15.33■□□□□ 0.04
HDAC6-204ENST00000376643 CLEC4EQ9ULY5 219 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms