RNA–Protein interactions for RNA: ENST00000376569.7

DDR1-226, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-226ENST00000376569 LCLAT1Q6UWP7 414 aa13.04□□□□□ -0.32
DDR1-226ENST00000376569 TMA16Q96EY4 203 aaKnown RBP13.04□□□□□ -0.32
DDR1-226ENST00000376569 KCTD15Q96SI1 283 aaPredicted RBP13.04□□□□□ -0.32
DDR1-226ENST00000376569 TSPYL2Q9H2G4 693 aaPredicted RBP13.04□□□□□ -0.32
DDR1-226ENST00000376569 ADGRA2Q96PE1 1338 aa13.04□□□□□ -0.32
DDR1-226ENST00000376569 CEP290O15078 2479 aa13.04□□□□□ -0.32
DDR1-226ENST00000376569 VAPBO95292 243 aa13.04□□□□□ -0.32
DDR1-226ENST00000376569 CPB1P15086 417 aa13.04□□□□□ -0.32
DDR1-226ENST00000376569 CYP3A5P20815 502 aa13.04□□□□□ -0.32
DDR1-226ENST00000376569 RFWD3Q6PCD5 774 aa13.04□□□□□ -0.32
DDR1-226ENST00000376569 CDHR3Q6ZTQ4 885 aa13.04□□□□□ -0.32
DDR1-226ENST00000376569 SNX31Q8N9S9 440 aa13.04□□□□□ -0.32
DDR1-226ENST00000376569 MTBPQ96DY7 904 aa13.04□□□□□ -0.32
DDR1-226ENST00000376569 SEPT5Q99719 369 aaPredicted RBP13.04□□□□□ -0.32
DDR1-226ENST00000376569 EPAS1Q99814 870 aa13.04□□□□□ -0.32
DDR1-226ENST00000376569 MPP6Q9NZW5 540 aa13.04□□□□□ -0.32
DDR1-226ENST00000376569 STYXL1Q9Y6J8 313 aa13.04□□□□□ -0.32
DDR1-226ENST00000376569 NHSQ6T4R5 1651 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 IQCA1LA6NCM1 817 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 DCXO43602 365 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 KRT36O76013 467 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 RPS6KA2Q15349 733 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 GSDMBQ8TAX9 411 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 MFSD3Q96ES6 412 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 APOPT1Q96IL0 206 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 WWP1Q9H0M0 922 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 SUDS3Q9H7L9 328 aaPredicted RBP13.03□□□□□ -0.32
DDR1-226ENST00000376569 YY1AP1Q9H869 796 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 SYBUQ9NX95 663 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 GRID1Q9ULK0 1009 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 TTC24A2A3L6 582 aaPredicted RBP13.03□□□□□ -0.32
DDR1-226ENST00000376569 MDM4O15151 490 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 PMM2O15305 246 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 BEST1O76090 585 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 ZFXP17010 805 aaPredicted RBP13.03□□□□□ -0.32
DDR1-226ENST00000376569 PSEN2P49810 448 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 PLIN5Q00G26 463 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 NSUN2Q08J23 767 aaKnown RBP eCLIP13.03□□□□□ -0.32
DDR1-226ENST00000376569 CTBP1Q13363 440 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 STILQ15468 1287 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 DCAF4L1Q3SXM0 396 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 RASIP1Q5U651 963 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 SPATA22Q8NHS9 363 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 NPLOC4Q8TAT6 608 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 BRI3BPQ8WY22 251 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 PPWD1Q96BP3 646 aaKnown RBP13.03□□□□□ -0.32
DDR1-226ENST00000376569 ALKBH8Q96BT7 664 aaKnown RBP13.03□□□□□ -0.32
DDR1-226ENST00000376569 PCDHGC3Q9UN70 934 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 IPPQ9Y573 584 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 RRN3P2A6NIE6 340 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 YJEFN3A6XGL0 299 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 E7ENQ6 273 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 SMIM24O75264 130 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 FGFR1P11362 822 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 SNX17Q15036 470 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 SLC45A4Q5BKX6 768 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 FBXO48Q5FWF7 155 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 OTOP3Q7RTS5 596 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 SPATA2LQ8IUW3 424 aaPredicted RBP13.03□□□□□ -0.32
DDR1-226ENST00000376569 TRIM42Q8IWZ5 723 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 TEX9Q8N6V9 391 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 NAT8LQ8N9F0 302 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 TMEM40Q8WWA1 233 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 LHX5Q9H2C1 402 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 VTA1Q9NP79 307 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 PNPOQ9NVS9 261 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 ADA2Q9NZK5 511 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 UBR3Q6ZT12 1888 aa13.03□□□□□ -0.32
DDR1-226ENST00000376569 C3orf70A6NLC5 250 aaPredicted RBP13.02□□□□□ -0.32
DDR1-226ENST00000376569 NT5C1B-RDH14C9J2C7 533 aa13.02□□□□□ -0.32
DDR1-226ENST00000376569 PIGRP01833 764 aa13.02□□□□□ -0.32
DDR1-226ENST00000376569 MX2P20592 715 aa13.02□□□□□ -0.32
DDR1-226ENST00000376569 CLCNKBP51801 687 aa13.02□□□□□ -0.32
DDR1-226ENST00000376569 TSPY1Q01534 308 aa13.02□□□□□ -0.32
DDR1-226ENST00000376569 AGGF1Q8N302 714 aaeCLIP13.02□□□□□ -0.325e-7■■■■■ 43.7
DDR1-226ENST00000376569 ATPAF2Q8N5M1 289 aa13.02□□□□□ -0.32
DDR1-226ENST00000376569 ANKRD52Q8NB46 1076 aa13.02□□□□□ -0.32
DDR1-226ENST00000376569 USP13Q92995 863 aaPredicted RBP13.02□□□□□ -0.32
DDR1-226ENST00000376569 PHF21BQ96EK2 531 aa13.02□□□□□ -0.32
DDR1-226ENST00000376569 ELMO2Q96JJ3 720 aa13.02□□□□□ -0.32
DDR1-226ENST00000376569 DDX50Q9BQ39 737 aaKnown RBP13.02□□□□□ -0.32
DDR1-226ENST00000376569 OR12D3Q9UGF7 316 aa13.02□□□□□ -0.32
DDR1-226ENST00000376569 GGA2Q9UJY4 613 aa13.02□□□□□ -0.32
DDR1-226ENST00000376569 PLA2G4CQ9UP65 541 aa13.02□□□□□ -0.32
DDR1-226ENST00000376569 NUP205Q92621 2012 aa13.02□□□□□ -0.32
DDR1-226ENST00000376569 COL4A5P29400 1685 aa13.02□□□□□ -0.32
DDR1-226ENST00000376569 SRRM3A6NNA2 597 aaPredicted RBP13.02□□□□□ -0.33
DDR1-226ENST00000376569 C9IYK1 514 aa13.02□□□□□ -0.33
DDR1-226ENST00000376569 DNAJC8O75937 253 aaPredicted RBP13.02□□□□□ -0.33
DDR1-226ENST00000376569 GNAT1P11488 350 aa13.02□□□□□ -0.33
DDR1-226ENST00000376569 CD52P31358 61 aa13.02□□□□□ -0.33
DDR1-226ENST00000376569 GJA9P57773 515 aa13.02□□□□□ -0.33
DDR1-226ENST00000376569 SPDYCQ5MJ68 293 aa13.02□□□□□ -0.33
DDR1-226ENST00000376569 OXNAD1Q96HP4 312 aaPredicted RBP13.02□□□□□ -0.33
DDR1-226ENST00000376569 MAML3Q96JK9 1138 aa13.02□□□□□ -0.33
DDR1-226ENST00000376569 AGAP2Q99490 1192 aa13.02□□□□□ -0.33
DDR1-226ENST00000376569 CHRAC1Q9NRG0 131 aa13.02□□□□□ -0.33
DDR1-226ENST00000376569 GEMIN8Q9NWZ8 242 aaKnown RBP13.02□□□□□ -0.33
DDR1-226ENST00000376569 VANGL2Q9ULK5 521 aa13.02□□□□□ -0.33
DDR1-226ENST00000376569 ST3GAL5Q9UNP4 418 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms