RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 ADCK1Q86TW2 530 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 KCNMB4Q86W47 210 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 HEATR4Q86WZ0 1026 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 HS6ST3Q8IZP7 471 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 ALLCQ8N6M5 410 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 COPS5Q92905 334 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 ZNF333Q96JL9 665 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 GPRC5DQ9NZD1 345 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 TRMT6Q9UJA5 497 aaKnown RBP11.15□□□□□ -0.62
CSMD2-204ENST00000373380 GGA2Q9UJY4 613 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 NUDT5Q9UKK9 219 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 RNF112Q9ULX5 631 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 HES2Q9Y543 173 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 SAC3D1A6NKF1 404 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 ASTN2O75129 1339 aaPredicted RBP11.15□□□□□ -0.62
CSMD2-204ENST00000373380 AVILO75366 819 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 ZMPSTE24O75844 475 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 DDHD2O94830 711 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 NAGLUP54802 743 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 OR9Q1Q8NGQ5 310 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 GDPD5Q8WTR4 605 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 PPP1R2P1Q96PQ5 205 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 SH3GL1Q99961 368 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 BCAS3Q9H6U6 928 aa11.15□□□□□ -0.62
CSMD2-204ENST00000373380 PNMA8BQ9ULN7 279 aaPredicted RBP11.15□□□□□ -0.62
CSMD2-204ENST00000373380 WBP4O75554 376 aaKnown RBP11.14□□□□□ -0.63
CSMD2-204ENST00000373380 GJB1P08034 283 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 ODC1P11926 461 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 ALADP13716 330 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 CCDC130P13994 396 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 RAG1P15918 1043 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 HARS2P49590 506 aaKnown RBP11.14□□□□□ -0.63
CSMD2-204ENST00000373380 FOXR2Q6PJQ5 311 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 TRAF7Q6Q0C0 670 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 ZSCAN18Q8TBC5 510 aaPredicted RBP11.14□□□□□ -0.63
CSMD2-204ENST00000373380 DNAJB3Q8WWF6 145 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 JADE3Q92613 823 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 OTULINQ96BN8 352 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 MROH8Q9H579 483 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 EXOSC4Q9NPD3 245 aaKnown RBP11.14□□□□□ -0.63
CSMD2-204ENST00000373380 CNGB3Q9NQW8 809 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 ETNK2Q9NVF9 386 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 CYP39A1Q9NYL5 469 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 CCDC167Q9P0B6 97 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 DRG1Q9Y295 367 aaKnown RBP11.14□□□□□ -0.63
CSMD2-204ENST00000373380 C17orf102A2RUQ5 167 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 DDX3YO15523 660 aaKnown RBP11.14□□□□□ -0.63
CSMD2-204ENST00000373380 KRT36O76013 467 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 NFICP08651 508 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 CETPP11597 493 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 CCR1P32246 355 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 CLK1P49759 484 aaKnown RBP11.14□□□□□ -0.63
CSMD2-204ENST00000373380 ZNF157P51786 506 aaPredicted RBP11.14□□□□□ -0.63
CSMD2-204ENST00000373380 CDH17Q12864 832 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 NFYCQ13952 458 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 ZNF470Q6ECI4 717 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 RASGEF1CQ8N431 466 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 ARL10Q8N8L6 244 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 LRRC57Q8N9N7 239 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 PIWIL2Q8TC59 973 aaKnown RBP11.14□□□□□ -0.63
CSMD2-204ENST00000373380 SH3TC2Q8TF17 1288 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 CCDC126Q96EE4 140 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 SYT15Q9BQS2 421 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 DNAJC5Q9H3Z4 198 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 FAM32AQ9Y421 112 aaKnown RBP11.14□□□□□ -0.63
CSMD2-204ENST00000373380 PRRG1O14668 218 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 PRPF4O43172 522 aaKnown RBP eCLIP11.14□□□□□ -0.63
CSMD2-204ENST00000373380 LCA5LO95447 670 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 PTDSS1P48651 473 aaKnown RBP11.14□□□□□ -0.63
CSMD2-204ENST00000373380 PRKAA1Q13131 559 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 MAPRE1Q15691 268 aaKnown RBP11.14□□□□□ -0.63
CSMD2-204ENST00000373380 TRIM60Q495X7 471 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 TRABD2AQ86V40 505 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 PLD3Q8IV08 490 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 EFCAB3Q8N7B9 438 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 PPP2R3CQ969Q6 453 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 TMEM161AQ9NX61 479 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 TMA7Q9Y2S6 64 aaKnown RBP11.14□□□□□ -0.63
CSMD2-204ENST00000373380 FARP1Q9Y4F1 1045 aaPredicted RBP11.14□□□□□ -0.63
CSMD2-204ENST00000373380 hCG_1818297A0A087WSY0 165 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 EVPLLA8MZ36 301 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 HNRNPCL2B2RXH8 293 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 PIGNO95427 931 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 PSMG1O95456 288 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 ASMTLO95671 621 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 SERPIND1P05546 499 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 SNHG28P0DPA3 235 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 CDH2P19022 906 aaPredicted RBP11.14□□□□□ -0.63
CSMD2-204ENST00000373380 HLA-DPA1P20036 260 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 CD151P48509 253 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 HSPA13P48723 471 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 HUNKP57058 714 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 GRIK4Q16099 956 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 LRRC38Q5VT99 294 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 BBS12Q6ZW61 710 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 SNX31Q8N9S9 440 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 ZNF184Q99676 751 aaPredicted RBP11.14□□□□□ -0.63
CSMD2-204ENST00000373380 CINPQ9BW66 212 aaPredicted RBP11.14□□□□□ -0.63
CSMD2-204ENST00000373380 CRLS1Q9UJA2 301 aa11.14□□□□□ -0.63
CSMD2-204ENST00000373380 ACTL7BQ9Y614 415 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms